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  5. GSVIVT01022464001

GSVIVT01022464001


Description : Binding partner of ACD11 1 OS=Arabidopsis thaliana


Gene families : OG0000598 (Archaeplastida) Phylogenetic Tree(s): OG0000598_tree ,
OG_05_0000999 (LandPlants) Phylogenetic Tree(s): OG_05_0000999_tree ,
OG_06_0010823 (SeedPlants) Phylogenetic Tree(s): OG_06_0010823_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01022464001
Cluster HCCA: Cluster_96

Target Alias Description ECC score Gene Family Method Actions
AT5G16840 BPA1 binding partner of acd11 1 0.03 Archaeplastida
Cpa|evm.model.tig00020961.103 No alias No description available 0.01 Archaeplastida
LOC_Os03g50560.1 No alias Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.05 Archaeplastida
LOC_Os03g53770.1 No alias Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Pp3c18_3230V3.1 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.03 Archaeplastida
Pp3c22_22390V3.1 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.02 Archaeplastida
Solyc02g067390.3.1 No alias Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc06g072770.3.1 No alias Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc08g076530.3.1 No alias Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e023279_P004 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e024575_P001 No alias Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e036683_P001 No alias Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005319 lipid transporter activity IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006869 lipid transport IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
BP GO:0008654 phospholipid biosynthetic process IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0016836 hydro-lyase activity IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
MF GO:0052855 ADP-dependent NAD(P)H-hydrate dehydratase activity IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:0061024 membrane organization IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
BP GO:0120009 intermembrane lipid transfer IEP Neighborhood
MF GO:0120013 intermembrane lipid transfer activity IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
InterPro domains Description Start Stop
IPR000504 RRM_dom 9 68
No external refs found!