GSVIVT01022601001

Description : RNA biosynthesis.transcriptional activation.NF-Y transcription factor complex.NF-YA component

Gene families : OG0000500 (Archaeplastida) Phylogenetic Tree(s): OG0000500_tree ,
OG_05_0000477 (LandPlants) Phylogenetic Tree(s): OG_05_0000477_tree ,
OG_06_0006367 (SeedPlants) Phylogenetic Tree(s): OG_06_0006367_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01022601001
Cluster	HCCA: Cluster_98

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00004p00174960	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NF-Y...	0.03	Archaeplastida
AT1G54160	NFYA5, NF-YA5	nuclear factor Y, subunit A5	0.03	Archaeplastida
AT3G05690	ATHAP2B, NF-YA2,...	nuclear factor Y, subunit A2	0.03	Archaeplastida
AT3G14020	NF-YA6	nuclear factor Y, subunit A6	0.02	Archaeplastida
AT5G06510	NF-YA10	nuclear factor Y, subunit A10	0.04	Archaeplastida
GSVIVT01015120001	No alias	RNA biosynthesis.transcriptional activation.NF-Y...	0.03	Archaeplastida
GSVIVT01016790001	No alias	RNA biosynthesis.transcriptional activation.NF-Y...	0.07	Archaeplastida
Gb_27081	No alias	component NF-YA of NF-Y transcription factor complex	0.04	Archaeplastida
Gb_31427	No alias	component NF-YA of NF-Y transcription factor complex	0.05	Archaeplastida
Gb_32704	No alias	component NF-YA of NF-Y transcription factor complex	0.04	Archaeplastida
Gb_32705	No alias	no hits & (original description: none)	0.03	Archaeplastida
LOC_Os03g29760.2	No alias	component NF-YA of NF-Y transcription factor complex	0.02	Archaeplastida
LOC_Os12g42400.2	No alias	component NF-YA of NF-Y transcription factor complex	0.03	Archaeplastida
MA_10431570g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_17313g0010	No alias	component NF-YA of NF-Y transcription factor complex	0.02	Archaeplastida
Pp3c11_21360V3.1	No alias	nuclear factor Y, subunit A3	0.02	Archaeplastida
Pp3c7_7470V3.1	No alias	nuclear factor Y, subunit A7	0.02	Archaeplastida
Solyc11g065700.2.1	No alias	component NF-YA of NF-Y transcription factor complex	0.03	Archaeplastida
Zm00001e003259_P001	No alias	component NF-YA of NF-Y transcription factor complex	0.06	Archaeplastida
Zm00001e005004_P001	No alias	component NF-YA of NF-Y transcription factor complex	0.08	Archaeplastida
Zm00001e005342_P003	No alias	component NF-YA of NF-Y transcription factor complex	0.04	Archaeplastida
Zm00001e012396_P001	No alias	component NF-YA of NF-Y transcription factor complex	0.01	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000271	polysaccharide biosynthetic process	IEP	Neighborhood
MF	GO:0003677	DNA binding	IEP	Neighborhood
MF	GO:0005506	iron ion binding	IEP	Neighborhood
BP	GO:0005976	polysaccharide metabolic process	IEP	Neighborhood
BP	GO:0006073	cellular glucan metabolic process	IEP	Neighborhood
BP	GO:0006855	drug transmembrane transport	IEP	Neighborhood
BP	GO:0006979	response to oxidative stress	IEP	Neighborhood
BP	GO:0008152	metabolic process	IEP	Neighborhood
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	Neighborhood
MF	GO:0008236	serine-type peptidase activity	IEP	Neighborhood
BP	GO:0009250	glucan biosynthetic process	IEP	Neighborhood
MF	GO:0015238	drug transmembrane transporter activity	IEP	Neighborhood
BP	GO:0015893	drug transport	IEP	Neighborhood
BP	GO:0016051	carbohydrate biosynthetic process	IEP	Neighborhood
MF	GO:0016491	oxidoreductase activity	IEP	Neighborhood
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Neighborhood
MF	GO:0016758	transferase activity, transferring hexosyl groups	IEP	Neighborhood
MF	GO:0016759	cellulose synthase activity	IEP	Neighborhood
MF	GO:0016760	cellulose synthase (UDP-forming) activity	IEP	Neighborhood
MF	GO:0017171	serine hydrolase activity	IEP	Neighborhood
MF	GO:0020037	heme binding	IEP	Neighborhood
BP	GO:0030243	cellulose metabolic process	IEP	Neighborhood
BP	GO:0030244	cellulose biosynthetic process	IEP	Neighborhood
BP	GO:0033692	cellular polysaccharide biosynthetic process	IEP	Neighborhood
BP	GO:0034637	cellular carbohydrate biosynthetic process	IEP	Neighborhood
MF	GO:0035251	UDP-glucosyltransferase activity	IEP	Neighborhood
MF	GO:0043169	cation binding	IEP	Neighborhood
MF	GO:0043565	sequence-specific DNA binding	IEP	Neighborhood
BP	GO:0044042	glucan metabolic process	IEP	Neighborhood
BP	GO:0044262	cellular carbohydrate metabolic process	IEP	Neighborhood
BP	GO:0044264	cellular polysaccharide metabolic process	IEP	Neighborhood
MF	GO:0046527	glucosyltransferase activity	IEP	Neighborhood
MF	GO:0046872	metal ion binding	IEP	Neighborhood
MF	GO:0046906	tetrapyrrole binding	IEP	Neighborhood
MF	GO:0046914	transition metal ion binding	IEP	Neighborhood
MF	GO:0048037	cofactor binding	IEP	Neighborhood
BP	GO:0051273	beta-glucan metabolic process	IEP	Neighborhood
BP	GO:0051274	beta-glucan biosynthetic process	IEP	Neighborhood
BP	GO:0055114	oxidation-reduction process	IEP	Neighborhood
MF	GO:0097159	organic cyclic compound binding	IEP	Neighborhood
MF	GO:1901363	heterocyclic compound binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001289	NFYA	163	217

External Links

No external refs found!

GSVIVT01022601001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation