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  5. GSVIVT01022683001

GSVIVT01022683001


Description : Protein BREVIS RADIX OS=Arabidopsis thaliana


Gene families : OG0001106 (Archaeplastida) Phylogenetic Tree(s): OG0001106_tree ,
OG_05_0000672 (LandPlants) Phylogenetic Tree(s): OG_05_0000672_tree ,
OG_06_0000629 (SeedPlants) Phylogenetic Tree(s): OG_06_0000629_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01022683001
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00209000 evm_27.TU.AmTr_v1... Protein BREVIS RADIX OS=Arabidopsis thaliana 0.06 Archaeplastida
AT3G14000 BRX-LIKE2, ATBRXL2 DZC (Disease resistance/zinc finger/chromosome... 0.03 Archaeplastida
GSVIVT01016782001 No alias Protein Brevis radix-like 2 OS=Arabidopsis thaliana 0.03 Archaeplastida
LOC_Os03g63650.1 No alias Protein Brevis radix-like 4 OS=Oryza sativa subsp.... 0.04 Archaeplastida
LOC_Os04g39940.1 No alias Putative protein Brevis radix-like 5 OS=Oryza sativa... 0.04 Archaeplastida
LOC_Os04g51172.1 No alias Putative protein Brevis radix-like 3 OS=Oryza sativa... 0.03 Archaeplastida
LOC_Os08g36020.1 No alias Protein Brevis radix-like 1 OS=Oryza sativa subsp.... 0.03 Archaeplastida
MA_33275g0010 No alias Protein Brevis radix-like 4 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Pp3c17_8500V3.1 No alias BREVIS RADIX-like 1 0.03 Archaeplastida
Solyc06g062880.2.1 No alias Protein Brevis radix-like 2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e006397_P001 No alias Protein Brevis radix-like 4 OS=Oryza sativa subsp.... 0.02 Archaeplastida
Zm00001e015552_P003 No alias Protein Brevis radix-like 2 OS=Oryza sativa subsp.... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Neighborhood
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Neighborhood
CC GO:0031011 Ino80 complex IEP Neighborhood
CC GO:0033202 DNA helicase complex IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0042393 histone binding IEP Neighborhood
CC GO:0044454 nuclear chromosome part IEP Neighborhood
CC GO:0070603 SWI/SNF superfamily-type complex IEP Neighborhood
CC GO:0097346 INO80-type complex IEP Neighborhood
CC GO:1904949 ATPase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR027988 BRX_N 28 59
IPR013591 Brevis_radix_dom 146 200
IPR013591 Brevis_radix_dom 287 342
No external refs found!