GSVIVT01022984001

Description : External stimuli response.biotic stress.pathogen effector.NLR effector receptor

Gene families : OG0000061 (Archaeplastida) Phylogenetic Tree(s): OG0000061_tree ,
OG_05_0000726 (LandPlants) Phylogenetic Tree(s): OG_05_0000726_tree ,
OG_06_0002481 (SeedPlants) Phylogenetic Tree(s): OG_06_0002481_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01022984001
Cluster	HCCA: Cluster_49

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00056p00215980	evm_27.TU.AmTr_v1...	Protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1...	0.05	Archaeplastida
AMTR_s00109p00126980	evm_27.TU.AmTr_v1...	Disease resistance protein TAO1 OS=Arabidopsis thaliana	0.03	Archaeplastida
AT1G27180	No alias	disease resistance protein (TIR-NBS-LRR class), putative	0.03	Archaeplastida
AT1G31540	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.1	Archaeplastida
AT1G56510	WRR4, ADR2	Disease resistance protein (TIR-NBS-LRR class)	0.08	Archaeplastida
AT1G56520	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.07	Archaeplastida
AT1G56540	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.07	Archaeplastida
AT1G63750	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.03	Archaeplastida
AT1G63880	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.03	Archaeplastida
AT1G69550	No alias	disease resistance protein (TIR-NBS-LRR class)	0.03	Archaeplastida
AT2G14080	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.05	Archaeplastida
AT2G16870	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.06	Archaeplastida
AT3G25505	No alias	No description available	0.03	Archaeplastida
AT3G44400	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.03	Archaeplastida
AT3G44480	cog1, RPP1	Disease resistance protein (TIR-NBS-LRR class) family	0.04	Archaeplastida
AT3G44630	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.06	Archaeplastida
AT3G44670	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.05	Archaeplastida
AT4G08450	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.03	Archaeplastida
AT4G11170	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.03	Archaeplastida
AT4G16860	RPP4	Disease resistance protein (TIR-NBS-LRR class) family	0.03	Archaeplastida
AT4G16890	SNC1, BAL	disease resistance protein (TIR-NBS-LRR class), putative	0.03	Archaeplastida
AT4G16990	RLM3	disease resistance protein (TIR-NBS class), putative	0.03	Archaeplastida
AT5G18360	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.09	Archaeplastida
AT5G22690	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.07	Archaeplastida
AT5G38344	No alias	Toll-Interleukin-Resistance (TIR) domain family protein	0.04	Archaeplastida
AT5G41740	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.04	Archaeplastida
AT5G41750	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.06	Archaeplastida
AT5G46260	No alias	disease resistance protein (TIR-NBS-LRR class) family	0.04	Archaeplastida
AT5G46450	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.04	Archaeplastida
AT5G46470	RPS6	disease resistance protein (TIR-NBS-LRR class) family	0.11	Archaeplastida
AT5G46490	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.04	Archaeplastida
AT5G46500	No alias	BEST Arabidopsis thaliana protein match is: disease...	0.04	Archaeplastida
AT5G46510	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.05	Archaeplastida
AT5G46520	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.07	Archaeplastida
AT5G58120	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.08	Archaeplastida
GSVIVT01001784001	No alias	No description available	0.03	Archaeplastida
GSVIVT01004877001	No alias	External stimuli response.biotic stress.pathogen...	0.04	Archaeplastida
GSVIVT01012762001	No alias	External stimuli response.biotic stress.pathogen...	0.06	Archaeplastida
GSVIVT01025907001	No alias	External stimuli response.biotic stress.pathogen...	0.1	Archaeplastida
GSVIVT01026003001	No alias	External stimuli response.biotic stress.pathogen...	0.03	Archaeplastida
Gb_00097	No alias	TMV resistance protein N OS=Nicotiana glutinosa...	0.03	Archaeplastida
Gb_00098	No alias	TMV resistance protein N OS=Nicotiana glutinosa...	0.03	Archaeplastida
Gb_11158	No alias	effector receptor (NLR)	0.03	Archaeplastida
Gb_11526	No alias	TMV resistance protein N OS=Nicotiana glutinosa...	0.02	Archaeplastida
Gb_12318	No alias	no hits & (original description: none)	0.04	Archaeplastida
Gb_16268	No alias	Probable disease resistance protein RPP1 OS=Arabidopsis...	0.02	Archaeplastida
Gb_21493	No alias	TMV resistance protein N OS=Nicotiana glutinosa...	0.04	Archaeplastida
Gb_26262	No alias	effector receptor (NLR)	0.02	Archaeplastida
Gb_29679	No alias	TMV resistance protein N OS=Nicotiana glutinosa...	0.05	Archaeplastida
MA_10433003g0040	No alias	effector receptor (NLR)	0.04	Archaeplastida
Solyc01g014840.3.1	No alias	effector receptor (NLR)	0.03	Archaeplastida
Solyc01g102840.3.1	No alias	effector receptor (NLR)	0.09	Archaeplastida
Solyc02g032650.3.1	No alias	effector receptor (NLR)	0.03	Archaeplastida
Solyc04g007320.3.1	No alias	effector receptor (NLR)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	Neighborhood
MF	GO:0005516	calmodulin binding	IEP	Neighborhood
BP	GO:0007165	signal transduction	IEP	Neighborhood
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	Neighborhood
BP	GO:0050789	regulation of biological process	IEP	Neighborhood
BP	GO:0050794	regulation of cellular process	IEP	Neighborhood
MF	GO:0061630	ubiquitin protein ligase activity	IEP	Neighborhood
MF	GO:0061659	ubiquitin-like protein ligase activity	IEP	Neighborhood
BP	GO:0065007	biological regulation	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000157	TIR_dom	83	259
IPR002182	NB-ARC	268	370

External Links

No external refs found!

GSVIVT01022984001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation