GSVIVT01023123001

Description : RNA biosynthesis.transcriptional activation.NAC transcription factor

Gene families : OG0000008 (Archaeplastida) Phylogenetic Tree(s): OG0000008_tree ,
OG_05_0000038 (LandPlants) Phylogenetic Tree(s): OG_05_0000038_tree ,
OG_06_0001766 (SeedPlants) Phylogenetic Tree(s): OG_06_0001766_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01023123001
Cluster	HCCA: Cluster_245

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00099p00163300	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.02	Archaeplastida
AT1G32510	NAC011, ANAC011	NAC domain containing protein 11	0.03	Archaeplastida
AT1G54330	ANAC020, NAC020	NAC domain containing protein 20	0.03	Archaeplastida
AT1G65910	anac028, NAC028	NAC domain containing protein 28	0.03	Archaeplastida
AT1G77450	NAC032, anac032	NAC domain containing protein 32	0.03	Archaeplastida
AT3G12977	No alias	NAC (No Apical Meristem) domain transcriptional...	0.03	Archaeplastida
AT3G61910	NST2, NAC066, ANAC066	NAC domain protein 66	0.03	Archaeplastida
AT4G17980	anac071, NAC071	NAC domain containing protein 71	0.03	Archaeplastida
AT5G08790	anac081, ATAF2	NAC (No Apical Meristem) domain transcriptional...	0.03	Archaeplastida
AT5G63790	ANAC102, NAC102	NAC domain containing protein 102	0.03	Archaeplastida
GSVIVT01014287001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
GSVIVT01028354001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.02	Archaeplastida
Gb_41026	No alias	transcription factor (NAC)	0.03	Archaeplastida
LOC_Os05g34830.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
LOC_Os08g40030.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
LOC_Os09g24560.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
LOC_Os10g42130.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
LOC_Os11g03370.1	No alias	transcription factor (NAC)	0.05	Archaeplastida
MA_109677g0010	No alias	transcription factor (NAC)	0.03	Archaeplastida
MA_27968g0010	No alias	transcription factor (NAC)	0.02	Archaeplastida
MA_5115g0010	No alias	transcription factor (NAC)	0.03	Archaeplastida
Pp3c5_570V3.1	No alias	NAC (No Apical Meristem) domain transcriptional...	0.03	Archaeplastida
Pp3c6_27690V3.1	No alias	NAC (No Apical Meristem) domain transcriptional...	0.04	Archaeplastida
Solyc04g005610.3.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
Solyc06g065410.3.1	No alias	transcription factor (NAC)	0.04	Archaeplastida
Solyc07g062840.3.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
Solyc10g005010.4.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e011934_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e019017_P002	No alias	transcription factor (NAC)	0.04	Archaeplastida
Zm00001e022817_P003	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e023108_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e029404_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e031694_P001	No alias	No annotation	0.04	Archaeplastida
Zm00001e036720_P002	No alias	transcription factor (NAC)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000413	protein peptidyl-prolyl isomerization	IEP	Neighborhood
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	Neighborhood
MF	GO:0005092	GDP-dissociation inhibitor activity	IEP	Neighborhood
MF	GO:0005094	Rho GDP-dissociation inhibitor activity	IEP	Neighborhood
MF	GO:0005515	protein binding	IEP	Neighborhood
BP	GO:0006553	lysine metabolic process	IEP	Neighborhood
MF	GO:0008839	4-hydroxy-tetrahydrodipicolinate reductase	IEP	Neighborhood
BP	GO:0009066	aspartate family amino acid metabolic process	IEP	Neighborhood
BP	GO:0009067	aspartate family amino acid biosynthetic process	IEP	Neighborhood
BP	GO:0009085	lysine biosynthetic process	IEP	Neighborhood
BP	GO:0009089	lysine biosynthetic process via diaminopimelate	IEP	Neighborhood
MF	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	IEP	Neighborhood
MF	GO:0016628	oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	IEP	Neighborhood
MF	GO:0016853	isomerase activity	IEP	Neighborhood
MF	GO:0016859	cis-trans isomerase activity	IEP	Neighborhood
BP	GO:0018193	peptidyl-amino acid modification	IEP	Neighborhood
BP	GO:0018208	peptidyl-proline modification	IEP	Neighborhood
MF	GO:0030695	GTPase regulator activity	IEP	Neighborhood
BP	GO:0043648	dicarboxylic acid metabolic process	IEP	Neighborhood
BP	GO:0046451	diaminopimelate metabolic process	IEP	Neighborhood
MF	GO:0046983	protein dimerization activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003441	NAC-dom	39	163

External Links

No external refs found!

GSVIVT01023123001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation