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  5. GSVIVT01023200001

GSVIVT01023200001


Description : RNA biosynthesis.transcriptional activation.FAR1 transcription factor


Gene families : OG0009767 (Archaeplastida) Phylogenetic Tree(s): OG0009767_tree ,
OG_05_0009829 (LandPlants) Phylogenetic Tree(s): OG_05_0009829_tree ,
OG_06_0008051 (SeedPlants) Phylogenetic Tree(s): OG_06_0008051_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01023200001
Cluster HCCA: Cluster_154

Target Alias Description ECC score Gene Family Method Actions
Solyc01g103180.4.1 No alias transcription factor (FAR1) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
BP GO:0007062 sister chromatid cohesion IEP Neighborhood
BP GO:0007064 mitotic sister chromatid cohesion IEP Neighborhood
BP GO:0016052 carbohydrate catabolic process IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
MF GO:0016160 amylase activity IEP Neighborhood
MF GO:0016161 beta-amylase activity IEP Neighborhood
BP GO:0022402 cell cycle process IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
BP GO:1903047 mitotic cell cycle process IEP Neighborhood
InterPro domains Description Start Stop
IPR007527 Znf_SWIM 228 256
No external refs found!