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  5. GSVIVT01023233001

GSVIVT01023233001


Description : Prolycopene isomerase, chloroplastic OS=Daucus carota


Gene families : OG0002780 (Archaeplastida) Phylogenetic Tree(s): OG0002780_tree ,
OG_05_0003783 (LandPlants) Phylogenetic Tree(s): OG_05_0003783_tree ,
OG_06_0007541 (SeedPlants) Phylogenetic Tree(s): OG_06_0007541_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01023233001
Cluster HCCA: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
AT1G57770 No alias FAD/NAD(P)-binding oxidoreductase family protein 0.07 Archaeplastida
Cpa|evm.model.tig00001258.10 No alias No description available 0.03 Archaeplastida
Cpa|evm.model.tig00020723.8 No alias No description available 0.01 Archaeplastida
Cre09.g407200 No alias Prolycopene isomerase, chloroplastic OS=Solanum lycopersicum 0.06 Archaeplastida
Gb_39487 No alias Prolycopene isomerase, chloroplastic OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os03g62510.1 No alias Prolycopene isomerase, chloroplastic OS=Daucus carota... 0.04 Archaeplastida
MA_10428345g0020 No alias Prolycopene isomerase, chloroplastic OS=Arabidopsis... 0.02 Archaeplastida
MA_10428660g0010 No alias Prolycopene isomerase 1, chloroplastic OS=Oncidium... 0.03 Archaeplastida
Mp7g17990.1 No alias Prolycopene isomerase, chloroplastic OS=Solanum... 0.03 Archaeplastida
Pp3c2_2830V3.1 No alias FAD/NAD(P)-binding oxidoreductase family protein 0.02 Archaeplastida
Pp3c8_1640V3.1 No alias FAD/NAD(P)-binding oxidoreductase family protein 0.07 Archaeplastida
Solyc05g010180.4.1 No alias Prolycopene isomerase, chloroplastic OS=Daucus carota... 0.07 Archaeplastida
Zm00001e011669_P002 No alias Prolycopene isomerase, chloroplastic OS=Daucus carota... 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
BP GO:0055114 oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0005984 disaccharide metabolic process IEP Neighborhood
BP GO:0005991 trehalose metabolic process IEP Neighborhood
BP GO:0005992 trehalose biosynthetic process IEP Neighborhood
BP GO:0009311 oligosaccharide metabolic process IEP Neighborhood
BP GO:0009312 oligosaccharide biosynthetic process IEP Neighborhood
BP GO:0032259 methylation IEP Neighborhood
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Neighborhood
BP GO:0046351 disaccharide biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR002937 Amino_oxidase 58 554
No external refs found!