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  5. GSVIVT01023256001

GSVIVT01023256001


Description : RNA biosynthesis.transcriptional activation.TIFY transcription factor


Gene families : OG0000437 (Archaeplastida) Phylogenetic Tree(s): OG0000437_tree ,
OG_05_0000221 (LandPlants) Phylogenetic Tree(s): OG_05_0000221_tree ,
OG_06_0004638 (SeedPlants) Phylogenetic Tree(s): OG_06_0004638_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01023256001
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00130370 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.TIFY... 0.02 Archaeplastida
AMTR_s00131p00119200 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.TIFY... 0.02 Archaeplastida
AT1G17380 TIFY11A, JAZ5 jasmonate-zim-domain protein 5 0.03 Archaeplastida
AT1G19180 TIFY10A, JAZ1 jasmonate-zim-domain protein 1 0.03 Archaeplastida
AT1G70700 JAZ9, TIFY7 TIFY domain/Divergent CCT motif family protein 0.03 Archaeplastida
AT5G13220 JAS1, JAZ10, TIFY9 jasmonate-zim-domain protein 10 0.04 Archaeplastida
Gb_24143 No alias transcription factor (TIFY) 0.02 Archaeplastida
LOC_Os03g08320.1 No alias transcription factor (TIFY) 0.03 Archaeplastida
LOC_Os07g42370.1 No alias component JAZ of jasmonic acid receptor complex.... 0.05 Archaeplastida
LOC_Os09g26780.1 No alias transcription factor (TIFY) 0.02 Archaeplastida
LOC_Os10g25290.1 No alias transcription factor (TIFY) 0.03 Archaeplastida
MA_10229741g0010 No alias transcription factor (TIFY) 0.04 Archaeplastida
MA_10426545g0010 No alias transcription factor (TIFY) 0.02 Archaeplastida
MA_10426545g0020 No alias transcription factor (TIFY) 0.03 Archaeplastida
MA_116760g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_131708g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_14247g0030 No alias transcription factor (TIFY) 0.04 Archaeplastida
MA_1854g0020 No alias transcription factor (TIFY) 0.03 Archaeplastida
MA_8757791g0010 No alias transcription factor (TIFY) 0.02 Archaeplastida
Mp6g06230.1 No alias transcription factor (TIFY) 0.05 Archaeplastida
Pp3c16_13490V3.1 No alias TIFY domain/Divergent CCT motif family protein 0.05 Archaeplastida
Pp3c25_6300V3.1 No alias jasmonate-zim-domain protein 4 0.04 Archaeplastida
Pp3c25_6330V3.1 No alias jasmonate-zim-domain protein 3 0.04 Archaeplastida
Pp3c5_11730V3.1 No alias TIFY domain/Divergent CCT motif family protein 0.03 Archaeplastida
Solyc07g042170.3.1 No alias component JAZ of jasmonic acid receptor complex.... 0.04 Archaeplastida
Solyc12g009220.2.1 No alias component JAZ of jasmonic acid receptor complex.... 0.04 Archaeplastida
Zm00001e000589_P001 No alias transcription factor (TIFY) 0.07 Archaeplastida
Zm00001e000590_P001 No alias transcription factor (TIFY) 0.03 Archaeplastida
Zm00001e001934_P001 No alias component JAZ of jasmonic acid receptor complex.... 0.03 Archaeplastida
Zm00001e004861_P001 No alias transcription factor (TIFY) 0.03 Archaeplastida
Zm00001e004862_P001 No alias transcription factor (TIFY) 0.04 Archaeplastida
Zm00001e006083_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e009884_P001 No alias Protein TIFY 10c OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Zm00001e012856_P001 No alias transcription factor (TIFY) 0.03 Archaeplastida
Zm00001e035549_P001 No alias component JAZ of jasmonic acid receptor complex.... 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006813 potassium ion transport IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
BP GO:0010215 cellulose microfibril organization IEP Neighborhood
MF GO:0015079 potassium ion transmembrane transporter activity IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0016049 cell growth IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
BP GO:0030198 extracellular matrix organization IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
BP GO:0040007 growth IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
BP GO:0043062 extracellular structure organization IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
BP GO:0071804 cellular potassium ion transport IEP Neighborhood
BP GO:0071805 potassium ion transmembrane transport IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
InterPro domains Description Start Stop
IPR018467 CCT_CS 141 165
IPR010399 Tify_dom 74 102
No external refs found!