GSVIVT01023467001

Description : RNA biosynthesis.RNA polymerase II-dependent transcription.SAGA transcription co-activator complex.TAF10 component

Gene families : OG0006057 (Archaeplastida) Phylogenetic Tree(s): OG0006057_tree ,
OG_05_0008487 (LandPlants) Phylogenetic Tree(s): OG_05_0008487_tree ,
OG_06_0008724 (SeedPlants) Phylogenetic Tree(s): OG_06_0008724_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01023467001
Cluster	HCCA: Cluster_1

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006352	DNA-templated transcription, initiation	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0032774	RNA biosynthetic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034654	nucleobase-containing compound biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000276	mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)	IEP	Neighborhood
BP	GO:0002097	tRNA wobble base modification	IEP	Neighborhood
BP	GO:0002098	tRNA wobble uridine modification	IEP	Neighborhood
MF	GO:0004298	threonine-type endopeptidase activity	IEP	Neighborhood
CC	GO:0005667	transcription factor complex	IEP	Neighborhood
CC	GO:0005672	transcription factor TFIIA complex	IEP	Neighborhood
CC	GO:0005839	proteasome core complex	IEP	Neighborhood
BP	GO:0006367	transcription initiation from RNA polymerase II promoter	IEP	Neighborhood
BP	GO:0006400	tRNA modification	IEP	Neighborhood
BP	GO:0006754	ATP biosynthetic process	IEP	Neighborhood
BP	GO:0008033	tRNA processing	IEP	Neighborhood
BP	GO:0009124	nucleoside monophosphate biosynthetic process	IEP	Neighborhood
BP	GO:0009127	purine nucleoside monophosphate biosynthetic process	IEP	Neighborhood
BP	GO:0009142	nucleoside triphosphate biosynthetic process	IEP	Neighborhood
BP	GO:0009144	purine nucleoside triphosphate metabolic process	IEP	Neighborhood
BP	GO:0009145	purine nucleoside triphosphate biosynthetic process	IEP	Neighborhood
BP	GO:0009156	ribonucleoside monophosphate biosynthetic process	IEP	Neighborhood
BP	GO:0009168	purine ribonucleoside monophosphate biosynthetic process	IEP	Neighborhood
BP	GO:0009199	ribonucleoside triphosphate metabolic process	IEP	Neighborhood
BP	GO:0009201	ribonucleoside triphosphate biosynthetic process	IEP	Neighborhood
BP	GO:0009205	purine ribonucleoside triphosphate metabolic process	IEP	Neighborhood
BP	GO:0009206	purine ribonucleoside triphosphate biosynthetic process	IEP	Neighborhood
BP	GO:0009451	RNA modification	IEP	Neighborhood
MF	GO:0015035	protein disulfide oxidoreductase activity	IEP	Neighborhood
MF	GO:0015036	disulfide oxidoreductase activity	IEP	Neighborhood
BP	GO:0015985	energy coupled proton transport, down electrochemical gradient	IEP	Neighborhood
BP	GO:0015986	ATP synthesis coupled proton transport	IEP	Neighborhood
MF	GO:0016667	oxidoreductase activity, acting on a sulfur group of donors	IEP	Neighborhood
CC	GO:0032991	protein-containing complex	IEP	Neighborhood
CC	GO:0033177	proton-transporting two-sector ATPase complex, proton-transporting domain	IEP	Neighborhood
CC	GO:0033588	Elongator holoenzyme complex	IEP	Neighborhood
BP	GO:0034470	ncRNA processing	IEP	Neighborhood
BP	GO:0034622	cellular protein-containing complex assembly	IEP	Neighborhood
BP	GO:0043933	protein-containing complex subunit organization	IEP	Neighborhood
CC	GO:0044422	organelle part	IEP	Neighborhood
CC	GO:0044429	mitochondrial part	IEP	Neighborhood
CC	GO:0044446	intracellular organelle part	IEP	Neighborhood
CC	GO:0044451	nucleoplasm part	IEP	Neighborhood
CC	GO:0044455	mitochondrial membrane part	IEP	Neighborhood
CC	GO:0044798	nuclear transcription factor complex	IEP	Neighborhood
CC	GO:0045263	proton-transporting ATP synthase complex, coupling factor F(o)	IEP	Neighborhood
BP	GO:0046034	ATP metabolic process	IEP	Neighborhood
BP	GO:0051603	proteolysis involved in cellular protein catabolic process	IEP	Neighborhood
BP	GO:0065003	protein-containing complex assembly	IEP	Neighborhood
MF	GO:0070003	threonine-type peptidase activity	IEP	Neighborhood
BP	GO:0070070	proton-transporting V-type ATPase complex assembly	IEP	Neighborhood
BP	GO:0070071	proton-transporting two-sector ATPase complex assembly	IEP	Neighborhood
BP	GO:0070072	vacuolar proton-transporting V-type ATPase complex assembly	IEP	Neighborhood
CC	GO:0090575	RNA polymerase II transcription factor complex	IEP	Neighborhood
CC	GO:0098798	mitochondrial protein complex	IEP	Neighborhood
CC	GO:0098800	inner mitochondrial membrane protein complex	IEP	Neighborhood
BP	GO:1902600	proton transmembrane transport	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003923	TFIID_30kDa	30	79

External Links

No external refs found!

GSVIVT01023467001

Expression Profile

Co-expression Networks

Functional Annotation