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Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ ubiquitin-fold protein
Gene families : OG0000077 (Archaeplastida) Phylogenetic Tree(s): OG0000077_tree ,
OG_05_0000511 (LandPlants) Phylogenetic Tree(s): OG_05_0000511_tree ,
OG_06_0000425 (SeedPlants) Phylogenetic Tree(s): OG_06_0000425_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: GSVIVT01023471001 | |
| Cluster | HCCA: Cluster_194 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G31340 | RUB1, ATRUB1, NEDD8 | related to ubiquitin 1 | 0.01 | Archaeplastida | |
| AT4G05050 | UBQ11 | ubiquitin 11 | 0.04 | Archaeplastida | |
| AT4G05320 | UBQ10 | polyubiquitin 10 | 0.02 | Archaeplastida | |
| Gb_02030 | No alias | ubiquitin-fold protein (UBQ) | 0.05 | Archaeplastida | |
| Gb_07386 | No alias | ubiquitin-fold protein (UBQ) | 0.03 | Archaeplastida | |
| Gb_35273 | No alias | ubiquitin-fold protein (UBQ) | 0.04 | Archaeplastida | |
| MA_1341909g0010 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
| MA_41251g0030 | No alias | ubiquitin-fold protein (UBQ) | 0.03 | Archaeplastida | |
| Mp4g02740.1 | No alias | ubiquitin-fold protein (UBQ) | 0.03 | Archaeplastida | |
| Zm00001e034164_P001 | No alias | ubiquitin-fold protein (RUB) | 0.06 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000123 | histone acetyltransferase complex | IEP | Neighborhood |
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| CC | GO:0005622 | intracellular | IEP | Neighborhood |
| BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Neighborhood |
| BP | GO:0006886 | intracellular protein transport | IEP | Neighborhood |
| BP | GO:0008104 | protein localization | IEP | Neighborhood |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Neighborhood |
| BP | GO:0010468 | regulation of gene expression | IEP | Neighborhood |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0015031 | protein transport | IEP | Neighborhood |
| BP | GO:0015833 | peptide transport | IEP | Neighborhood |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0019222 | regulation of metabolic process | IEP | Neighborhood |
| CC | GO:0031248 | protein acetyltransferase complex | IEP | Neighborhood |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | Neighborhood |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Neighborhood |
| BP | GO:0033036 | macromolecule localization | IEP | Neighborhood |
| BP | GO:0042886 | amide transport | IEP | Neighborhood |
| CC | GO:0044428 | nuclear part | IEP | Neighborhood |
| CC | GO:0044451 | nucleoplasm part | IEP | Neighborhood |
| CC | GO:0044464 | cell part | IEP | Neighborhood |
| BP | GO:0045184 | establishment of protein localization | IEP | Neighborhood |
| BP | GO:0046907 | intracellular transport | IEP | Neighborhood |
| BP | GO:0050789 | regulation of biological process | IEP | Neighborhood |
| BP | GO:0050794 | regulation of cellular process | IEP | Neighborhood |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Neighborhood |
| BP | GO:0051641 | cellular localization | IEP | Neighborhood |
| BP | GO:0051649 | establishment of localization in cell | IEP | Neighborhood |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0065007 | biological regulation | IEP | Neighborhood |
| CC | GO:0070461 | SAGA-type complex | IEP | Neighborhood |
| BP | GO:0071702 | organic substance transport | IEP | Neighborhood |
| BP | GO:0071705 | nitrogen compound transport | IEP | Neighborhood |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Neighborhood |
| CC | GO:1902493 | acetyltransferase complex | IEP | Neighborhood |
| CC | GO:1902494 | catalytic complex | IEP | Neighborhood |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Neighborhood |
| CC | GO:1990234 | transferase complex | IEP | Neighborhood |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000626 | Ubiquitin_dom | 196 | 267 |
| IPR000626 | Ubiquitin_dom | 44 | 115 |
| IPR000626 | Ubiquitin_dom | 14 | 39 |
| IPR000626 | Ubiquitin_dom | 640 | 711 |
| IPR000626 | Ubiquitin_dom | 488 | 559 |
| IPR000626 | Ubiquitin_dom | 729 | 763 |
| IPR000626 | Ubiquitin_dom | 272 | 343 |
| IPR000626 | Ubiquitin_dom | 120 | 191 |
| IPR000626 | Ubiquitin_dom | 564 | 635 |
| IPR000626 | Ubiquitin_dom | 412 | 483 |
| No external refs found! |