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  5. GSVIVT01023615001

GSVIVT01023615001


Description : APO protein 2, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0000992 (Archaeplastida) Phylogenetic Tree(s): OG0000992_tree ,
OG_05_0001157 (LandPlants) Phylogenetic Tree(s): OG_05_0001157_tree ,
OG_06_0003046 (SeedPlants) Phylogenetic Tree(s): OG_06_0003046_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01023615001
Cluster HCCA: Cluster_155

Target Alias Description ECC score Gene Family Method Actions
MA_136047g0010 No alias APO protein 2, chloroplastic OS=Arabidopsis thaliana... 0.05 Archaeplastida
Solyc08g080250.4.1 No alias APO protein 1, chloroplastic OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc09g009400.4.1 No alias APO protein 3, mitochondrial OS=Arabidopsis thaliana... 0.06 Archaeplastida
Zm00001e006942_P002 No alias APO protein 1, chloroplastic OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e023481_P001 No alias APO protein 2, chloroplastic OS=Arabidopsis thaliana... 0.08 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Neighborhood
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood
InterPro domains Description Start Stop
IPR023342 APO_dom 110 307
IPR023342 APO_dom 346 456
No external refs found!