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  5. GSVIVT01023642001

GSVIVT01023642001


Description : Protein biosynthesis.organelle translation machineries.translation initiation.IF-3 initiation factor


Gene families : OG0001978 (Archaeplastida) Phylogenetic Tree(s): OG0001978_tree ,
OG_05_0007195 (LandPlants) Phylogenetic Tree(s): OG_05_0007195_tree ,
OG_06_0008342 (SeedPlants) Phylogenetic Tree(s): OG_06_0008342_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01023642001
Cluster HCCA: Cluster_162

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00137p00042790 evm_27.TU.AmTr_v1... Protein biosynthesis.organelle translation... 0.03 Archaeplastida
AT2G24060 No alias Translation initiation factor 3 protein 0.03 Archaeplastida
Cre01.g001550 No alias Protein biosynthesis.organelle translation... 0.02 Archaeplastida
LOC_Os02g55120.1 No alias IF-3 translation initiation factor 0.05 Archaeplastida
Mp4g21530.1 No alias IF-3 translation initiation factor 0.02 Archaeplastida
Pp3c14_5800V3.1 No alias Translation initiation factor 3 protein 0.06 Archaeplastida
Pp3c2_19940V3.1 No alias Translation initiation factor 3 protein 0.04 Archaeplastida
Solyc07g005830.3.1 No alias IF-3 translation initiation factor 0.03 Archaeplastida
Zm00001e016109_P001 No alias IF-3 translation initiation factor 0.05 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006413 translational initiation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
BP GO:0006415 translational termination IEP Neighborhood
BP GO:0006605 protein targeting IEP Neighborhood
BP GO:0006612 protein targeting to membrane IEP Neighborhood
BP GO:0006613 cotranslational protein targeting to membrane IEP Neighborhood
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Neighborhood
MF GO:0008173 RNA methyltransferase activity IEP Neighborhood
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP Neighborhood
BP GO:0009767 photosynthetic electron transport chain IEP Neighborhood
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP Neighborhood
BP GO:0019725 cellular homeostasis IEP Neighborhood
BP GO:0022411 cellular component disassembly IEP Neighborhood
BP GO:0022900 electron transport chain IEP Neighborhood
BP GO:0032984 protein-containing complex disassembly IEP Neighborhood
BP GO:0033365 protein localization to organelle IEP Neighborhood
BP GO:0034613 cellular protein localization IEP Neighborhood
BP GO:0042592 homeostatic process IEP Neighborhood
BP GO:0043624 cellular protein complex disassembly IEP Neighborhood
BP GO:0045047 protein targeting to ER IEP Neighborhood
BP GO:0045454 cell redox homeostasis IEP Neighborhood
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
BP GO:0070727 cellular macromolecule localization IEP Neighborhood
BP GO:0070972 protein localization to endoplasmic reticulum IEP Neighborhood
BP GO:0072594 establishment of protein localization to organelle IEP Neighborhood
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Neighborhood
BP GO:0072657 protein localization to membrane IEP Neighborhood
BP GO:0090150 establishment of protein localization to membrane IEP Neighborhood
MF GO:0098809 nitrite reductase activity IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
InterPro domains Description Start Stop
IPR019814 Translation_initiation_fac_3_N 87 151
IPR019815 Translation_initiation_fac_3_C 163 246
No external refs found!