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  5. GSVIVT01023788001

GSVIVT01023788001


Description : Syntaxin-112 OS=Arabidopsis thaliana


Gene families : OG0000372 (Archaeplastida) Phylogenetic Tree(s): OG0000372_tree ,
OG_05_0014004 (LandPlants) Phylogenetic Tree(s): OG_05_0014004_tree ,
OG_06_0015178 (SeedPlants) Phylogenetic Tree(s): OG_06_0015178_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01023788001
Cluster HCCA: Cluster_186

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00235020 evm_27.TU.AmTr_v1... Vesicle trafficking.SNARE target membrane recognition... 0.03 Archaeplastida
AMTR_s00045p00039700 evm_27.TU.AmTr_v1... Vesicle trafficking.SNARE target membrane recognition... 0.03 Archaeplastida
AMTR_s00103p00119740 evm_27.TU.AmTr_v1... Vesicle trafficking.SNARE target membrane recognition... 0.03 Archaeplastida
AT1G11250 SYP125, ATSYP125 syntaxin of plants 125 0.03 Archaeplastida
AT3G11820 SYP121,... syntaxin of plants 121 0.03 Archaeplastida
AT3G52400 SYP122, ATSYP122 syntaxin of plants 122 0.03 Archaeplastida
LOC_Os03g52650.1 No alias Qa-SNARE component KNOLLE of SNARE cell-plate vesicle... 0.02 Archaeplastida
MA_132768g0010 No alias SYP1-group Qa-type SNARE component 0.03 Archaeplastida
Smo130326 No alias Vesicle trafficking.SNARE target membrane recognition... 0.03 Archaeplastida
Solyc01g006950.3.1 No alias SYP1-group Qa-type SNARE component 0.02 Archaeplastida
Solyc01g109750.2.1 No alias SYP1-group Qa-type SNARE component 0.06 Archaeplastida
Solyc02g085090.1.1 No alias SYP1-group Qa-type SNARE component 0.03 Archaeplastida
Zm00001e032875_P002 No alias no hits & (original description: none) 0.05 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Neighborhood
MF GO:0003777 microtubule motor activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006928 movement of cell or subcellular component IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007018 microtubule-based movement IEP Neighborhood
MF GO:0008017 microtubule binding IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
MF GO:0015631 tubulin binding IEP Neighborhood
InterPro domains Description Start Stop
IPR006011 Syntaxin_N 42 118
No external refs found!