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  5. GSVIVT01023884001

GSVIVT01023884001


Description : Pentatricopeptide repeat-containing protein At2g17210 OS=Arabidopsis thaliana


Gene families : OG0003154 (Archaeplastida) Phylogenetic Tree(s): OG0003154_tree ,
OG_05_0004920 (LandPlants) Phylogenetic Tree(s): OG_05_0004920_tree ,
OG_06_0004953 (SeedPlants) Phylogenetic Tree(s): OG_06_0004953_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01023884001
Cluster HCCA: Cluster_109

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00170650 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008237 metallopeptidase activity IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0016866 intramolecular transferase activity IEP Neighborhood
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Neighborhood
InterPro domains Description Start Stop
IPR032190 NPC1_N 853 1081
IPR002885 Pentatricopeptide_repeat 503 551
IPR002885 Pentatricopeptide_repeat 302 348
IPR002885 Pentatricopeptide_repeat 402 449
IPR002885 Pentatricopeptide_repeat 183 200
IPR002885 Pentatricopeptide_repeat 102 126
IPR002885 Pentatricopeptide_repeat 276 301
IPR002885 Pentatricopeptide_repeat 202 229
IPR002885 Pentatricopeptide_repeat 74 99
IPR002885 Pentatricopeptide_repeat 578 605
IPR003392 Ptc/Disp 1373 1698
IPR003392 Ptc/Disp 1850 2067
No external refs found!