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  5. GSVIVT01023998001

GSVIVT01023998001


No description available


Gene families : OG0003285 (Archaeplastida) Phylogenetic Tree(s): OG0003285_tree ,
OG_05_0003755 (LandPlants) Phylogenetic Tree(s): OG_05_0003755_tree ,
OG_06_0004534 (SeedPlants) Phylogenetic Tree(s): OG_06_0004534_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01023998001
Cluster HCCA: Cluster_247

Target Alias Description ECC score Gene Family Method Actions
AT5G09880 No alias Splicing factor, CC1-like 0.04 Archaeplastida
Cpa|evm.model.tig00001302.16 No alias No description available 0.01 Archaeplastida
Gb_39308 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os03g05830.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os10g30370.1 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10430689g0020 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc11g005170.2.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e004710_P005 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP Neighborhood
MF GO:0003916 DNA topoisomerase activity IEP Neighborhood
MF GO:0003917 DNA topoisomerase type I activity IEP Neighborhood
MF GO:0004559 alpha-mannosidase activity IEP Neighborhood
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP Neighborhood
CC GO:0005694 chromosome IEP Neighborhood
BP GO:0006265 DNA topological change IEP Neighborhood
BP GO:0006547 histidine metabolic process IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
BP GO:0007062 sister chromatid cohesion IEP Neighborhood
BP GO:0007064 mitotic sister chromatid cohesion IEP Neighborhood
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Neighborhood
BP GO:0009072 aromatic amino acid family metabolic process IEP Neighborhood
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Neighborhood
MF GO:0015923 mannosidase activity IEP Neighborhood
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP Neighborhood
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Neighborhood
BP GO:0022402 cell cycle process IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
BP GO:0052803 imidazole-containing compound metabolic process IEP Neighborhood
BP GO:0071103 DNA conformation change IEP Neighborhood
BP GO:1903047 mitotic cell cycle process IEP Neighborhood
InterPro domains Description Start Stop
IPR000504 RRM_dom 48 106
IPR000504 RRM_dom 357 409
IPR000504 RRM_dom 143 213
IPR029123 RBM39_linker 233 350
No external refs found!