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  5. GSVIVT01024008001

GSVIVT01024008001


Description : RNA biosynthesis.transcriptional activation.bHLH transcription factor


Gene families : OG0000184 (Archaeplastida) Phylogenetic Tree(s): OG0000184_tree ,
OG_05_0000297 (LandPlants) Phylogenetic Tree(s): OG_05_0000297_tree ,
OG_06_0002202 (SeedPlants) Phylogenetic Tree(s): OG_06_0002202_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01024008001
Cluster HCCA: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00085090 evm_27.TU.AmTr_v1... Transcription factor SCREAM2 OS=Arabidopsis thaliana 0.01 Archaeplastida
AT2G16910 AMS basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.07 Archaeplastida
AT2G28160 ATBHLH029,... FER-like regulator of iron uptake 0.03 Archaeplastida
AT3G26744 ATICE1, ICE1, SCRM basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Archaeplastida
AT4G21330 DYT1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.05 Archaeplastida
AT4G29930 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
AT5G65640 bHLH093 beta HLH protein 93 0.03 Archaeplastida
GSVIVT01009234001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.01 Archaeplastida
Gb_15579 No alias transcription factor (bHLH) 0.04 Archaeplastida
Gb_36380 No alias transcription factor (bHLH) 0.02 Archaeplastida
LOC_Os02g02820.1 No alias transcription factor (bHLH) 0.06 Archaeplastida
LOC_Os07g36460.1 No alias transcription factor (bHLH) 0.01 Archaeplastida
LOC_Os10g39750.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
MA_20585g0010 No alias transcription factor (bHLH). transcription factor (ICE1|2) 0.01 Archaeplastida
MA_448849g0010 No alias transcription factor (bHLH). transcription factor (ICE1|2) 0.03 Archaeplastida
MA_63506g0010 No alias transcription factor (bHLH). transcription factor (ICE1|2) 0.02 Archaeplastida
Mp4g04920.1 No alias transcription factor (bHLH). transcription factor (ICE1|2) 0.02 Archaeplastida
Pp3c1_20960V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
Pp3c3_15850V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c8_18070V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
Smo75047 No alias External stimuli response.temperature.ICE-CBF cold... 0.02 Archaeplastida
Solyc02g079810.3.1 No alias transcription factor (bHLH) 0.08 Archaeplastida
Solyc02g091690.3.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
Solyc05g005300.2.1 No alias transcription factor (bHLH) 0.06 Archaeplastida
Solyc06g051550.4.1 No alias transcription factor (bHLH). iron uptake transcription factor FIT 0.05 Archaeplastida
Solyc08g062780.2.1 No alias transcription factor (bHLH) 0.09 Archaeplastida
Zm00001e010525_P001 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e021526_P001 No alias transcription factor (bHLH). transcription factor (ICE1|2) 0.03 Archaeplastida
Zm00001e025243_P003 No alias transcription factor (bHLH) 0.08 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003756 protein disulfide isomerase activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003864 3-methyl-2-oxobutanoate hydroxymethyltransferase activity IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0004402 histone acetyltransferase activity IEP Neighborhood
CC GO:0005741 mitochondrial outer membrane IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006473 protein acetylation IEP Neighborhood
BP GO:0006475 internal protein amino acid acetylation IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
BP GO:0006520 cellular amino acid metabolic process IEP Neighborhood
BP GO:0006575 cellular modified amino acid metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
MF GO:0008080 N-acetyltransferase activity IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0015939 pantothenate metabolic process IEP Neighborhood
BP GO:0015940 pantothenate biosynthetic process IEP Neighborhood
MF GO:0016407 acetyltransferase activity IEP Neighborhood
MF GO:0016410 N-acyltransferase activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
BP GO:0016573 histone acetylation IEP Neighborhood
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Neighborhood
MF GO:0016864 intramolecular oxidoreductase activity, transposing S-S bonds IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
BP GO:0018393 internal peptidyl-lysine acetylation IEP Neighborhood
BP GO:0018394 peptidyl-lysine acetylation IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
CC GO:0031968 organelle outer membrane IEP Neighborhood
MF GO:0034212 peptide N-acetyltransferase activity IEP Neighborhood
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0043543 protein acylation IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
CC GO:0098805 whole membrane IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR011598 bHLH_dom 333 377
IPR025610 MYC/MYB_N 43 194
No external refs found!