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  5. GSVIVT01024036001

GSVIVT01024036001


Description : RNA biosynthesis.transcriptional activation.MYB superfamily.MYB transcription factor


Gene families : OG0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000002 (LandPlants) Phylogenetic Tree(s): OG_05_0000002_tree ,
OG_06_0000006 (SeedPlants) Phylogenetic Tree(s): OG_06_0000006_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01024036001
Cluster HCCA: Cluster_94

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00219710 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00056p00204920 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
AMTR_s01267p00006490 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
AT2G32460 ATMYB101, MYB101, ATM1 myb domain protein 101 0.01 Archaeplastida
AT3G53200 AtMYB27, MYB27 myb domain protein 27 0.01 Archaeplastida
AT4G01680 MYB55, AtMYB55 myb domain protein 55 0.02 Archaeplastida
AT5G10280 ATMYB64, ATMYB92, MYB92 myb domain protein 92 0.02 Archaeplastida
AT5G52260 MYB19, AtMYB19 myb domain protein 19 0.02 Archaeplastida
AT5G55020 ATMYB120, MYB120 myb domain protein 120 0.02 Archaeplastida
GSVIVT01007731001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
GSVIVT01018234001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
GSVIVT01024774001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01030708001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
GSVIVT01034041001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Gb_00379 No alias transcription factor (MYB) 0.01 Archaeplastida
Gb_03994 No alias transcription factor (MYB) 0.01 Archaeplastida
Gb_23598 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os01g03720.1 No alias transcription factor (MYB) 0.01 Archaeplastida
LOC_Os01g74590.1 No alias transcription factor (MYB) 0.01 Archaeplastida
LOC_Os02g40530.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os07g31470.1 No alias transcription factor (MYB) 0.01 Archaeplastida
LOC_Os08g05520.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os08g33940.1 No alias transcription factor (MYB) 0.01 Archaeplastida
LOC_Os12g07610.1 No alias transcription factor (MYB) 0.01 Archaeplastida
MA_10433651g0010 No alias transcription factor (MYB) 0.01 Archaeplastida
MA_1589g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_199974g0010 No alias transcription factor (MYB) 0.01 Archaeplastida
MA_30848g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_446064g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_45091g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_53644g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_9818613g0010 No alias transcription factor (MYB) 0.01 Archaeplastida
Mp5g14610.1 No alias transcription factor (MYB) 0.01 Archaeplastida
Pp3c16_9970V3.1 No alias myb domain protein 106 0.01 Archaeplastida
Pp3c18_340V3.1 No alias myb domain protein 105 0.01 Archaeplastida
Solyc03g112890.1.1 No alias transcription factor (MYB) 0.01 Archaeplastida
Solyc05g053150.2.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc12g099120.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc12g099140.2.1 No alias transcription factor (MYB) 0.07 Archaeplastida
Zm00001e018471_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e028085_P001 No alias transcription factor (MYB) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Neighborhood
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 67 111
IPR001005 SANT/Myb 14 61
No external refs found!