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  5. GSVIVT01024040001

GSVIVT01024040001


Description : Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana


Gene families : OG0015529 (Archaeplastida) Phylogenetic Tree(s): OG0015529_tree ,
OG_05_0012081 (LandPlants) Phylogenetic Tree(s): OG_05_0012081_tree ,
OG_06_0012161 (SeedPlants) Phylogenetic Tree(s): OG_06_0012161_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01024040001
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g68524.1 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 462 509
IPR002885 Pentatricopeptide_repeat 361 388
IPR002885 Pentatricopeptide_repeat 130 154
IPR002885 Pentatricopeptide_repeat 29 56
IPR002885 Pentatricopeptide_repeat 159 188
IPR002885 Pentatricopeptide_repeat 435 457
IPR002885 Pentatricopeptide_repeat 58 84
IPR002885 Pentatricopeptide_repeat 333 354
IPR002885 Pentatricopeptide_repeat 260 289
No external refs found!