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  5. GSVIVT01024099001

GSVIVT01024099001


Description : Putative disease resistance protein At1g50180 OS=Arabidopsis thaliana


Gene families : OG0000088 (Archaeplastida) Phylogenetic Tree(s): OG0000088_tree ,
OG_05_0013480 (LandPlants) Phylogenetic Tree(s): OG_05_0013480_tree ,
OG_06_0013478 (SeedPlants) Phylogenetic Tree(s): OG_06_0013478_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01024099001
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00195990 evm_27.TU.AmTr_v1... Probable disease resistance RPP8-like protein 2... 0.06 Archaeplastida
AMTR_s00058p00097500 evm_27.TU.AmTr_v1... Disease resistance protein RPM1 OS=Arabidopsis thaliana 0.04 Archaeplastida
AMTR_s00090p00087950 evm_27.TU.AmTr_v1... Disease resistance protein RPP13 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00090p00088070 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00090p00137350 evm_27.TU.AmTr_v1... Disease resistance protein RPP13 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s02154p00002280 evm_27.TU.AmTr_v1... Disease resistance RPP8-like protein 3 OS=Arabidopsis thaliana 0.02 Archaeplastida
AT1G50180 No alias NB-ARC domain-containing disease resistance protein 0.03 Archaeplastida
AT1G58410 No alias Disease resistance protein (CC-NBS-LRR class) family 0.07 Archaeplastida
AT1G58602 No alias LRR and NB-ARC domains-containing disease resistance protein 0.05 Archaeplastida
AT3G46530 RPP13 NB-ARC domain-containing disease resistance protein 0.03 Archaeplastida
AT3G50950 ZAR1 HOPZ-ACTIVATED RESISTANCE 1 0.05 Archaeplastida
AT5G35450 No alias Disease resistance protein (CC-NBS-LRR class) family 0.04 Archaeplastida
GSVIVT01018564001 No alias Putative disease resistance RPP13-like protein 3... 0.05 Archaeplastida
GSVIVT01024101001 No alias Disease resistance protein RPP13 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01026740001 No alias Putative disease resistance protein At1g50180... 0.04 Archaeplastida
GSVIVT01026747001 No alias Putative disease resistance protein At1g50180... 0.04 Archaeplastida
GSVIVT01032830001 No alias Probable disease resistance RPP8-like protein 2... 0.04 Archaeplastida
Gb_10846 No alias Probable disease resistance protein At1g61180... 0.04 Archaeplastida
Gb_25804 No alias Probable disease resistance protein At1g61180... 0.03 Archaeplastida
Gb_29699 No alias Disease resistance protein RPS5 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os08g10260.1 No alias no description available(sp|q2r8l1|rga5s_orysj : 447.0) 0.09 Archaeplastida
LOC_Os11g11960.1 No alias Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os11g12000.1 No alias Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.05 Archaeplastida
MA_423032g0010 No alias no hits & (original description: none) 0.07 Archaeplastida
Solyc04g009690.2.1 No alias Disease resistance protein RPP13 OS=Arabidopsis thaliana... 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0004888 transmembrane signaling receptor activity IEP Neighborhood
MF GO:0004970 ionotropic glutamate receptor activity IEP Neighborhood
MF GO:0005216 ion channel activity IEP Neighborhood
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
MF GO:0005543 phospholipid binding IEP Neighborhood
MF GO:0005544 calcium-dependent phospholipid binding IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
MF GO:0008066 glutamate receptor activity IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
MF GO:0015276 ligand-gated ion channel activity IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0022824 transmitter-gated ion channel activity IEP Neighborhood
MF GO:0022834 ligand-gated channel activity IEP Neighborhood
MF GO:0022835 transmitter-gated channel activity IEP Neighborhood
MF GO:0022836 gated channel activity IEP Neighborhood
MF GO:0022838 substrate-specific channel activity IEP Neighborhood
MF GO:0022839 ion gated channel activity IEP Neighborhood
MF GO:0030594 neurotransmitter receptor activity IEP Neighborhood
MF GO:0038023 signaling receptor activity IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
MF GO:0060089 molecular transducer activity IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
InterPro domains Description Start Stop
IPR002182 NB-ARC 505 707
IPR002182 NB-ARC 180 257
No external refs found!