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  5. GSVIVT01024100001

GSVIVT01024100001


Description : Putative disease resistance protein At1g50180 OS=Arabidopsis thaliana


Gene families : OG0000088 (Archaeplastida) Phylogenetic Tree(s): OG0000088_tree ,
OG_05_0000027 (LandPlants) Phylogenetic Tree(s): OG_05_0000027_tree ,
OG_06_0000027 (SeedPlants) Phylogenetic Tree(s): OG_06_0000027_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01024100001
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00163970 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00061p00165330 evm_27.TU.AmTr_v1... Disease resistance protein RPP13 OS=Arabidopsis thaliana 0.04 Archaeplastida
AMTR_s00061p00207600 evm_27.TU.AmTr_v1... Disease resistance RPP8-like protein 3 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00090p00088070 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s00090p00137350 evm_27.TU.AmTr_v1... Disease resistance protein RPP13 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s02154p00002280 evm_27.TU.AmTr_v1... Disease resistance RPP8-like protein 3 OS=Arabidopsis thaliana 0.02 Archaeplastida
AT1G58410 No alias Disease resistance protein (CC-NBS-LRR class) family 0.06 Archaeplastida
AT1G58602 No alias LRR and NB-ARC domains-containing disease resistance protein 0.04 Archaeplastida
AT3G46530 RPP13 NB-ARC domain-containing disease resistance protein 0.05 Archaeplastida
AT3G50950 ZAR1 HOPZ-ACTIVATED RESISTANCE 1 0.04 Archaeplastida
ChrUn.fgenesh.mRNA.26 No alias Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
GSVIVT01018564001 No alias Putative disease resistance RPP13-like protein 3... 0.07 Archaeplastida
GSVIVT01032830001 No alias Probable disease resistance RPP8-like protein 2... 0.05 Archaeplastida
Gb_10846 No alias Probable disease resistance protein At1g61180... 0.06 Archaeplastida
LOC_Os08g10260.1 No alias no description available(sp|q2r8l1|rga5s_orysj : 447.0) 0.06 Archaeplastida
LOC_Os10g21400.1 No alias Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.08 Archaeplastida
LOC_Os11g12000.1 No alias Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_423032g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc04g009690.2.1 No alias Disease resistance protein RPP13 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Solyc07g039420.1.1 No alias Disease resistance protein RPP13 OS=Arabidopsis thaliana... 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0004888 transmembrane signaling receptor activity IEP Neighborhood
MF GO:0004970 ionotropic glutamate receptor activity IEP Neighborhood
MF GO:0005216 ion channel activity IEP Neighborhood
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
MF GO:0008066 glutamate receptor activity IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
MF GO:0015276 ligand-gated ion channel activity IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0022824 transmitter-gated ion channel activity IEP Neighborhood
MF GO:0022834 ligand-gated channel activity IEP Neighborhood
MF GO:0022835 transmitter-gated channel activity IEP Neighborhood
MF GO:0022836 gated channel activity IEP Neighborhood
MF GO:0022838 substrate-specific channel activity IEP Neighborhood
MF GO:0022839 ion gated channel activity IEP Neighborhood
MF GO:0030594 neurotransmitter receptor activity IEP Neighborhood
MF GO:0038023 signaling receptor activity IEP Neighborhood
MF GO:0060089 molecular transducer activity IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
InterPro domains Description Start Stop
IPR002182 NB-ARC 189 281
No external refs found!