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  5. AMTR_s00041p00176840

AMTR_s00041p00176840 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00041.136

Description : Dirigent protein 21 OS=Arabidopsis thaliana


Gene families : OG0000064 (Archaeplastida) Phylogenetic Tree(s): OG0000064_tree ,
OG_05_0000024 (LandPlants) Phylogenetic Tree(s): OG_05_0000024_tree ,
OG_06_0000028 (SeedPlants) Phylogenetic Tree(s): OG_06_0000028_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00041p00176840
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
Gb_24573 No alias Dirigent protein 23 OS=Arabidopsis thaliana... 0.05 Archaeplastida
LOC_Os07g01620.1 No alias Dirigent protein 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os07g42520.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os10g25900.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os12g07580.1 No alias Dirigent protein 3 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_10427702g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
MA_10429923g0030 No alias Dirigent protein 23 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_2299832g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_71201g0010 No alias Dirigent protein 11 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_748721g0010 No alias Dirigent protein 2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_8761341g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Smo437893 No alias Dirigent protein 21 OS=Arabidopsis thaliana 0.01 Archaeplastida
Smo59090 No alias Dirigent protein 1 OS=Arabidopsis thaliana 0.07 Archaeplastida
Solyc04g008080.1.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e024535_P001 No alias Dirigent protein 21 OS=Arabidopsis thaliana... 0.01 Archaeplastida
Zm00001e039498_P001 No alias Dirigent protein 19 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e039501_P001 No alias Dirigent protein 19 OS=Arabidopsis thaliana... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004190 aspartic-type endopeptidase activity IEP Neighborhood
MF GO:0004797 thymidine kinase activity IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0019136 deoxynucleoside kinase activity IEP Neighborhood
MF GO:0019205 nucleobase-containing compound kinase activity IEP Neighborhood
MF GO:0019206 nucleoside kinase activity IEP Neighborhood
MF GO:0070001 aspartic-type peptidase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR004265 Dirigent 33 175
No external refs found!