GSVIVT01024180001

Description : Cold shock protein 1 OS=Arabidopsis thaliana

Gene families : OG0005188 (Archaeplastida) Phylogenetic Tree(s): OG0005188_tree ,
OG_05_0004258 (LandPlants) Phylogenetic Tree(s): OG_05_0004258_tree ,
OG_06_0005624 (SeedPlants) Phylogenetic Tree(s): OG_06_0005624_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01024180001
Cluster	HCCA: Cluster_63

Target	Alias	Description	ECC score	Gene Family Method	Actions
Pp3c4_13389V3.1	No alias	zinc knuckle (CCHC-type) family protein	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001878	Znf_CCHC	81	96
IPR001878	Znf_CCHC	99	114
IPR001878	Znf_CCHC	219	235
IPR001878	Znf_CCHC	163	179
IPR001878	Znf_CCHC	42	58
IPR001878	Znf_CCHC	144	159
IPR001878	Znf_CCHC	125	141
IPR001878	Znf_CCHC	199	213
IPR001878	Znf_CCHC	61	76

External Links

No external refs found!