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  5. AMTR_s00041p00176950

AMTR_s00041p00176950 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00041.137

Description : Dirigent protein 11 OS=Arabidopsis thaliana


Gene families : OG0000064 (Archaeplastida) Phylogenetic Tree(s): OG0000064_tree ,
OG_05_0000024 (LandPlants) Phylogenetic Tree(s): OG_05_0000024_tree ,
OG_06_0000028 (SeedPlants) Phylogenetic Tree(s): OG_06_0000028_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00041p00176950
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00178600 evm_27.TU.AmTr_v1... Dirigent protein 11 OS=Arabidopsis thaliana 0.05 Archaeplastida
AMTR_s00041p00187220 evm_27.TU.AmTr_v1... Dirigent protein 21 OS=Arabidopsis thaliana 0.05 Archaeplastida
AMTR_s00134p00119640 evm_27.TU.AmTr_v1... Dirigent protein 21 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s04787p00001380 evm_27.TU.AmTr_v1... Dirigent protein 21 OS=Arabidopsis thaliana 0.05 Archaeplastida
AT1G55210 No alias Disease resistance-responsive (dirigent-like protein)... 0.02 Archaeplastida
GSVIVT01033453001 No alias Dirigent protein 19 OS=Arabidopsis thaliana 0.04 Archaeplastida
Gb_08448 No alias Dirigent protein 11 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os03g52920.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os07g01660.1 No alias Dirigent protein 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os10g25870.1 No alias Dirigent protein 2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os10g25900.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os11g07670.1 No alias Dirigent protein 21 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os11g07690.1 No alias Dirigent protein 19 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os11g07770.1 No alias Dirigent protein 2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os11g42500.1 No alias Dirigent protein 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os11g42550.1 No alias Dirigent protein 21 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Pp3c15_14930V3.1 No alias Disease resistance-responsive (dirigent-like protein)... 0.02 Archaeplastida
Solyc10g055190.1.1 No alias Dirigent protein 23 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc10g055200.1.1 No alias Dirigent protein 23 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e006622_P001 No alias Dirigent protein 23 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Zm00001e016900_P002 No alias Dirigent protein 2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e024535_P001 No alias Dirigent protein 21 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e039498_P001 No alias Dirigent protein 19 OS=Arabidopsis thaliana... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
CC GO:0005853 eukaryotic translation elongation factor 1 complex IEP Neighborhood
BP GO:0006414 translational elongation IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
InterPro domains Description Start Stop
IPR004265 Dirigent 50 195
No external refs found!