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  5. GSVIVT01024206001

GSVIVT01024206001


Description : RNA biosynthesis.transcriptional activation.SRS transcription factor


Gene families : OG0001199 (Archaeplastida) Phylogenetic Tree(s): OG0001199_tree ,
OG_05_0000755 (LandPlants) Phylogenetic Tree(s): OG_05_0000755_tree ,
OG_06_0000578 (SeedPlants) Phylogenetic Tree(s): OG_06_0000578_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01024206001
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
AT1G19790 SRS7 SHI-related sequence 7 0.03 Archaeplastida
AT2G21400 SRS3 SHI-related sequence3 0.04 Archaeplastida
AT3G51060 SRS1, STY1 Lateral root primordium (LRP) protein-related 0.05 Archaeplastida
AT4G36260 SRS2, STY2 Lateral root primordium (LRP) protein-related 0.03 Archaeplastida
AT5G12330 LRP1 Lateral root primordium (LRP) protein-related 0.03 Archaeplastida
GSVIVT01009812001 No alias RNA biosynthesis.transcriptional activation.SRS... 0.05 Archaeplastida
LOC_Os01g72490.1 No alias transcription factor (SRS) 0.06 Archaeplastida
LOC_Os05g32070.1 No alias transcription factor (SRS) 0.05 Archaeplastida
LOC_Os06g49830.1 No alias transcription factor (SRS) 0.04 Archaeplastida
LOC_Os09g36160.1 No alias transcription factor (SRS) 0.04 Archaeplastida
MA_2299g0010 No alias transcription factor (SRS) 0.03 Archaeplastida
MA_53545g0010 No alias transcription factor (SRS) 0.03 Archaeplastida
Pp3c18_8920V3.1 No alias Lateral root primordium (LRP) protein-related 0.02 Archaeplastida
Solyc02g062400.3.1 No alias transcription factor (SRS) 0.04 Archaeplastida
Solyc10g054070.1.1 No alias transcription factor (SRS) 0.04 Archaeplastida
Zm00001e013256_P002 No alias transcription factor (SRS) 0.03 Archaeplastida
Zm00001e030189_P001 No alias transcription factor (SRS) 0.04 Archaeplastida
Zm00001e031567_P001 No alias transcription factor (SRS) 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0002376 immune system process IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
BP GO:0006952 defense response IEP Neighborhood
BP GO:0006955 immune response IEP Neighborhood
BP GO:0045087 innate immune response IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!