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  5. GSVIVT01024225001

GSVIVT01024225001


Description : Chromatin organisation.DNA methylation.canonical RNA-directed DNA methylation pathway.DNA methylation accessory complex (DDR).DRD1 component


Gene families : OG0000450 (Archaeplastida) Phylogenetic Tree(s): OG0000450_tree ,
OG_05_0001964 (LandPlants) Phylogenetic Tree(s): OG_05_0001964_tree ,
OG_06_0001705 (SeedPlants) Phylogenetic Tree(s): OG_06_0001705_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01024225001
Cluster HCCA: Cluster_221

Target Alias Description ECC score Gene Family Method Actions
AT2G16390 DMS1, DRD1, CHR35 SNF2 domain-containing protein / helicase... 0.04 Archaeplastida
AT3G42670 CLSY, CHR38 chromatin remodeling 38 0.03 Archaeplastida
GSVIVT01023832001 No alias Protein CHROMATIN REMODELING 35 OS=Arabidopsis thaliana 0.03 Archaeplastida
LOC_Os06g14440.1 No alias chromatin remodeling factor (DRD1). component DRD1 of... 0.03 Archaeplastida
Mp4g09280.1 No alias Protein CHROMATIN REMODELING 35 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Pp3c1_36240V3.1 No alias SNF2 domain-containing protein / helicase... 0.07 Archaeplastida
Solyc06g050510.3.1 No alias RDR2-polymerase accessory protein (CLSY1/2) 0.03 Archaeplastida
Zm00001e035938_P002 No alias No annotation 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
BP GO:0006720 isoprenoid metabolic process IEP Neighborhood
BP GO:0006721 terpenoid metabolic process IEP Neighborhood
BP GO:0006813 potassium ion transport IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
BP GO:0008299 isoprenoid biosynthetic process IEP Neighborhood
MF GO:0008536 Ran GTPase binding IEP Neighborhood
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
MF GO:0015079 potassium ion transmembrane transporter activity IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
BP GO:0016114 terpenoid biosynthetic process IEP Neighborhood
MF GO:0016744 transferase activity, transferring aldehyde or ketonic groups IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
BP GO:0071804 cellular potassium ion transport IEP Neighborhood
BP GO:0071805 potassium ion transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR001650 Helicase_C 664 773
IPR000330 SNF2_N 430 538
No external refs found!