Description : Alanine--tRNA ligase OS=Arabidopsis thaliana

Gene families : OG0001306 (Archaeplastida) Phylogenetic Tree(s): OG0001306_tree ,
OG_05_0001493 (LandPlants) Phylogenetic Tree(s): OG_05_0001493_tree ,
OG_06_0007719 (SeedPlants) Phylogenetic Tree(s): OG_06_0007719_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: GSVIVT01024313001
Cluster HCCA: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01024320001 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0004813 alanine-tRNA ligase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006419 alanyl-tRNA aminoacylation IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Neighborhood
BP GO:0008037 cell recognition IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
BP GO:0048544 recognition of pollen IEP Neighborhood
InterPro domains Description Start Stop
IPR012947 tRNA_SAD 176 203
IPR018164 Ala-tRNA-synth_IIc_N 15 121
No external refs found!