GSVIVT01024536001

Description : RNA biosynthesis.transcriptional activation.B3 superfamily.REM transcription factor

Gene families : OG0000741 (Archaeplastida) Phylogenetic Tree(s): OG0000741_tree ,
OG_05_0001199 (LandPlants) Phylogenetic Tree(s): OG_05_0001199_tree ,
OG_06_0001296 (SeedPlants) Phylogenetic Tree(s): OG_06_0001296_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01024536001

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00077p00151100	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.B3...	0.02	Archaeplastida
AT5G58280	No alias	AP2/B3-like transcriptional factor family protein	0.01	Archaeplastida
GSVIVT01031761001	No alias	RNA biosynthesis.transcriptional activation.B3...	0.02	Archaeplastida
Gb_07025	No alias	transcription factor (REM)	0.02	Archaeplastida
Mp2g08790.1	No alias	transcription factor (REM)	0.02	Archaeplastida
Pp3c17_16150V3.1	No alias	AP2/B3-like transcriptional factor family protein	0.02	Archaeplastida
Pp3c2_5990V3.1	No alias	AP2/B3-like transcriptional factor family protein	0.01	Archaeplastida
Solyc04g079130.2.1	No alias	transcription factor (REM)	0.01	Archaeplastida
Solyc06g007530.2.1	No alias	transcription factor (REM)	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0000786	nucleosome	IEP	Neighborhood
CC	GO:0032991	protein-containing complex	IEP	Neighborhood
CC	GO:0032993	protein-DNA complex	IEP	Neighborhood
CC	GO:0044422	organelle part	IEP	Neighborhood
CC	GO:0044427	chromosomal part	IEP	Neighborhood
CC	GO:0044446	intracellular organelle part	IEP	Neighborhood
CC	GO:0044815	DNA packaging complex	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003340	B3_DNA-bd	133	223

External Links

No external refs found!