GSVIVT01024537001

Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL10 component

Gene families : OG0002582 (Archaeplastida) Phylogenetic Tree(s): OG0002582_tree ,
OG_05_0002513 (LandPlants) Phylogenetic Tree(s): OG_05_0002513_tree ,
OG_06_0003989 (SeedPlants) Phylogenetic Tree(s): OG_06_0003989_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01024537001
Cluster	HCCA: Cluster_69

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00072p00080890	evm_27.TU.AmTr_v1...	Protein biosynthesis.cytosolic ribosome.large subunit...	0.03	Archaeplastida
AMTR_s00077p00151750	evm_27.TU.AmTr_v1...	Protein biosynthesis.cytosolic ribosome.large subunit...	0.02	Archaeplastida
AT1G14320	SAC52, RPL10, RPL10A	Ribosomal protein L16p/L10e family protein	0.16	Archaeplastida
Cpa\|evm.model.tig00001424.5	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.06	Archaeplastida
Gb_06067	No alias	component RPL10 of LSU proteome component	0.06	Archaeplastida
LOC_Os11g11390.1	No alias	component RPL10 of LSU proteome component	0.06	Archaeplastida
MA_17326g0010	No alias	component RPL10 of LSU proteome component	0.08	Archaeplastida
Mp4g23990.1	No alias	component RPL10 of LSU proteome component	0.09	Archaeplastida
Pp3c11_4130V3.1	No alias	Ribosomal protein L16p/L10e family protein	0.09	Archaeplastida
Pp3c1_3170V3.1	No alias	Ribosomal protein L16p/L10e family protein	0.11	Archaeplastida
Pp3c2_29600V3.1	No alias	Ribosomal protein L16p/L10e family protein	0.14	Archaeplastida
Pp3c7_22400V3.1	No alias	Ribosomal protein L16p/L10e family protein	0.06	Archaeplastida
Smo437527	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.05	Archaeplastida
Solyc06g007520.4.1	No alias	component RPL10 of LSU proteome component	0.12	Archaeplastida
Solyc06g082650.4.1	No alias	component RPL10 of LSU proteome component	0.13	Archaeplastida
Solyc06g082670.3.1	No alias	component RPL10 of LSU proteome component	0.1	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0005622	intracellular	IEP	Neighborhood
MF	GO:0008963	phospho-N-acetylmuramoyl-pentapeptide-transferase activity	IEP	Neighborhood
MF	GO:0016780	phosphotransferase activity, for other substituted phosphate groups	IEP	Neighborhood
BP	GO:0046907	intracellular transport	IEP	Neighborhood
BP	GO:0051649	establishment of localization in cell	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR016180	Ribosomal_L10e/L16	12	166

External Links

No external refs found!

GSVIVT01024537001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation