GSVIVT01024537001


Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL10 component


Gene families : OG0002582 (Archaeplastida) Phylogenetic Tree(s): OG0002582_tree ,
OG_05_0002513 (LandPlants) Phylogenetic Tree(s): OG_05_0002513_tree ,
OG_06_0003989 (SeedPlants) Phylogenetic Tree(s): OG_06_0003989_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01024537001
Cluster HCCA: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00072p00080890 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 Archaeplastida
AMTR_s00077p00151750 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 Archaeplastida
AT1G14320 SAC52, RPL10, RPL10A Ribosomal protein L16p/L10e family protein 0.16 Archaeplastida
Cpa|evm.model.tig00001424.5 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.06 Archaeplastida
Gb_06067 No alias component RPL10 of LSU proteome component 0.06 Archaeplastida
LOC_Os11g11390.1 No alias component RPL10 of LSU proteome component 0.06 Archaeplastida
MA_17326g0010 No alias component RPL10 of LSU proteome component 0.08 Archaeplastida
Mp4g23990.1 No alias component RPL10 of LSU proteome component 0.09 Archaeplastida
Pp3c11_4130V3.1 No alias Ribosomal protein L16p/L10e family protein 0.09 Archaeplastida
Pp3c1_3170V3.1 No alias Ribosomal protein L16p/L10e family protein 0.11 Archaeplastida
Pp3c2_29600V3.1 No alias Ribosomal protein L16p/L10e family protein 0.14 Archaeplastida
Pp3c7_22400V3.1 No alias Ribosomal protein L16p/L10e family protein 0.06 Archaeplastida
Smo437527 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.05 Archaeplastida
Solyc06g007520.4.1 No alias component RPL10 of LSU proteome component 0.12 Archaeplastida
Solyc06g082650.4.1 No alias component RPL10 of LSU proteome component 0.13 Archaeplastida
Solyc06g082670.3.1 No alias component RPL10 of LSU proteome component 0.1 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0005622 intracellular IEP Neighborhood
MF GO:0008963 phospho-N-acetylmuramoyl-pentapeptide-transferase activity IEP Neighborhood
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
InterPro domains Description Start Stop
IPR016180 Ribosomal_L10e/L16 12 166
No external refs found!