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  5. GSVIVT01024541001

GSVIVT01024541001


Description : Root phototropism protein 2 OS=Arabidopsis thaliana


Gene families : OG0000044 (Archaeplastida) Phylogenetic Tree(s): OG0000044_tree ,
OG_05_0000480 (LandPlants) Phylogenetic Tree(s): OG_05_0000480_tree ,
OG_06_0000628 (SeedPlants) Phylogenetic Tree(s): OG_06_0000628_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01024541001
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00038p00155420 evm_27.TU.AmTr_v1... Root phototropism protein 3 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00049p00216130 evm_27.TU.AmTr_v1... BTB/POZ domain-containing protein At1g67900... 0.03 Archaeplastida
AMTR_s00057p00189750 evm_27.TU.AmTr_v1... BTB/POZ domain-containing protein At1g03010... 0.05 Archaeplastida
AMTR_s00061p00175030 evm_27.TU.AmTr_v1... BTB/POZ domain-containing protein At5g47800... 0.03 Archaeplastida
AT2G30520 RPT2 Phototropic-responsive NPH3 family protein 0.03 Archaeplastida
AT3G22104 No alias Phototropic-responsive NPH3 family protein 0.03 Archaeplastida
AT3G50840 No alias Phototropic-responsive NPH3 family protein 0.03 Archaeplastida
AT5G48800 No alias Phototropic-responsive NPH3 family protein 0.03 Archaeplastida
GSVIVT01010983001 No alias BTB/POZ domain-containing protein At1g03010... 0.05 Archaeplastida
GSVIVT01028637001 No alias BTB/POZ domain-containing protein At5g48800... 0.03 Archaeplastida
GSVIVT01031416001 No alias BTB/POZ domain-containing protein At3g44820... 0.02 Archaeplastida
Gb_00052 No alias Root phototropism protein 2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_00511 No alias component NPH3 of CUL3-BTB E3 ubiquitin ligase complex 0.02 Archaeplastida
Gb_29473 No alias BTB/POZ domain-containing protein At1g30440... 0.02 Archaeplastida
Gb_31331 No alias BTB/POZ domain-containing protein At1g30440... 0.03 Archaeplastida
LOC_Os03g10800.2 No alias BTB/POZ domain-containing protein NPY2 OS=Arabidopsis... 0.04 Archaeplastida
LOC_Os03g52880.1 No alias BTB/POZ domain-containing protein At5g66560... 0.02 Archaeplastida
LOC_Os04g57800.1 No alias component BPH1 of CUL3-BTB E3 ubiquitin ligase complex 0.03 Archaeplastida
LOC_Os05g12030.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os07g39530.1 No alias BTB/POZ domain-containing protein At5g48130... 0.03 Archaeplastida
LOC_Os11g02610.1 No alias Root phototropism protein 2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os12g02540.1 No alias BTB/POZ domain-containing protein At3g08570... 0.02 Archaeplastida
MA_10592g0020 No alias BTB/POZ domain-containing protein At5g48130... 0.04 Archaeplastida
MA_89781g0010 No alias BTB/POZ domain-containing protein At5g48130... 0.02 Archaeplastida
Pp3c5_19090V3.1 No alias Phototropic-responsive NPH3 family protein 0.01 Archaeplastida
Smo156140 No alias BTB/POZ domain-containing protein At5g48800... 0.02 Archaeplastida
Smo81263 No alias BTB/POZ domain-containing protein At5g48130... 0.03 Archaeplastida
Solyc01g081140.1.1 No alias BTB/POZ domain-containing protein At5g17580... 0.02 Archaeplastida
Solyc01g105680.4.1 No alias component NPH3 of CUL3-BTB E3 ubiquitin ligase complex 0.02 Archaeplastida
Solyc05g013570.3.1 No alias BTB/POZ domain-containing protein At1g67900... 0.03 Archaeplastida
Solyc07g052970.3.1 No alias BTB/POZ domain-containing protein At3g22104... 0.01 Archaeplastida
Solyc10g049660.2.1 No alias BTB/POZ domain-containing protein NPY2 OS=Arabidopsis... 0.04 Archaeplastida
Solyc11g040040.2.1 No alias component BPH1 of CUL3-BTB E3 ubiquitin ligase complex 0.03 Archaeplastida
Solyc11g066730.2.1 No alias BTB/POZ domain-containing protein At3g44820... 0.04 Archaeplastida
Zm00001e008748_P001 No alias Coleoptile phototropism protein 1 OS=Oryza sativa subsp.... 0.03 Archaeplastida
Zm00001e009259_P001 No alias Root phototropism protein 2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e014883_P001 No alias component NPH3 of CUL3-BTB E3 ubiquitin ligase complex 0.02 Archaeplastida
Zm00001e014998_P003 No alias BTB/POZ domain-containing protein At1g67900... 0.02 Archaeplastida
Zm00001e035388_P001 No alias BTB/POZ domain-containing protein At5g48130... 0.03 Archaeplastida
Zm00001e039271_P001 No alias Root phototropism protein 2 OS=Arabidopsis thaliana... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP Neighborhood
MF GO:0004089 carbonate dehydratase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
MF GO:0005543 phospholipid binding IEP Neighborhood
MF GO:0005544 calcium-dependent phospholipid binding IEP Neighborhood
BP GO:0006400 tRNA modification IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
MF GO:0008175 tRNA methyltransferase activity IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016426 tRNA (adenine) methyltransferase activity IEP Neighborhood
MF GO:0016429 tRNA (adenine-N1-)-methyltransferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
BP GO:0030488 tRNA methylation IEP Neighborhood
CC GO:0031515 tRNA (m1A) methyltransferase complex IEP Neighborhood
CC GO:0034708 methyltransferase complex IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
CC GO:0043527 tRNA methyltransferase complex IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
InterPro domains Description Start Stop
IPR000210 BTB/POZ_dom 10 100
No external refs found!