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  5. GSVIVT01024559001

GSVIVT01024559001


Description : RNA biosynthesis.transcriptional activation.B3 superfamily.LAV-VAL transcription factor


Gene families : OG0002264 (Archaeplastida) Phylogenetic Tree(s): OG0002264_tree ,
OG_05_0002646 (LandPlants) Phylogenetic Tree(s): OG_05_0002646_tree ,
OG_06_0002238 (SeedPlants) Phylogenetic Tree(s): OG_06_0002238_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01024559001
Cluster HCCA: Cluster_68

Target Alias Description ECC score Gene Family Method Actions
MA_732760g0010 No alias B3 domain-containing transcription repressor VAL2... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006354 DNA-templated transcription, elongation IEP Neighborhood
BP GO:0006368 transcription elongation from RNA polymerase II promoter IEP Neighborhood
CC GO:0008023 transcription elongation factor complex IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
CC GO:0016593 Cdc73/Paf1 complex IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
InterPro domains Description Start Stop
IPR011124 Znf_CW 527 569
IPR003340 B3_DNA-bd 297 396
No external refs found!