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  5. GSVIVT01024591001

GSVIVT01024591001


Description : RNA processing.organelle machineries.RNA splicing.plastidial RNA splicing.group-II intron splicing.THA8 splicing factor


Gene families : OG0000306 (Archaeplastida) Phylogenetic Tree(s): OG0000306_tree ,
OG_05_0000732 (LandPlants) Phylogenetic Tree(s): OG_05_0000732_tree ,
OG_06_0002392 (SeedPlants) Phylogenetic Tree(s): OG_06_0002392_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01024591001
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
LOC_Os04g39970.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Smo432504 No alias No description available 0.05 Archaeplastida
Solyc10g074610.3.1 No alias no hits & (original description: none) 0.06 Archaeplastida
Solyc12g098990.2.1 No alias Pentatricopeptide repeat-containing protein At3g06430,... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0030163 protein catabolic process IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 136 183
No external refs found!