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  5. GSVIVT01024592001

GSVIVT01024592001


Description : RNA biosynthesis.transcriptional activation.AS2/LOB transcription factor


Gene families : OG0000101 (Archaeplastida) Phylogenetic Tree(s): OG0000101_tree ,
OG_05_0000037 (LandPlants) Phylogenetic Tree(s): OG_05_0000037_tree ,
OG_06_0002612 (SeedPlants) Phylogenetic Tree(s): OG_06_0002612_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01024592001
Cluster HCCA: Cluster_195

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00148530 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AS2/LOB... 0.01 Archaeplastida
AT2G28500 LBD11 LOB domain-containing protein 11 0.04 Archaeplastida
AT2G30130 LBD12, ASL5, PCK1 Lateral organ boundaries (LOB) domain family protein 0.03 Archaeplastida
AT2G40470 LBD15, ASL11 LOB domain-containing protein 15 0.04 Archaeplastida
Gb_13424 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Gb_38119 No alias transcription factor (AS2/LOB) 0.01 Archaeplastida
Gb_40767 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
LOC_Os05g07270.1 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
MA_10434782g0020 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
MA_113501g0010 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida
MA_445236g0010 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
MA_9839150g0010 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Pp3c20_10200V3.1 No alias Lateral organ boundaries (LOB) domain family protein 0.03 Archaeplastida
Pp3c4_18330V3.1 No alias LOB domain-containing protein 27 0.02 Archaeplastida
Solyc03g113360.4.1 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Solyc06g007390.4.1 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Zm00001e019424_P001 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Zm00001e026736_P001 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Zm00001e031510_P001 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida
Zm00001e038429_P001 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000502 proteasome complex IEP Neighborhood
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Neighborhood
MF GO:0004602 glutathione peroxidase activity IEP Neighborhood
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0009894 regulation of catabolic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0016226 iron-sulfur cluster assembly IEP Neighborhood
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Neighborhood
BP GO:0017003 protein-heme linkage IEP Neighborhood
BP GO:0017004 cytochrome complex assembly IEP Neighborhood
BP GO:0017006 protein-tetrapyrrole linkage IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0019725 cellular homeostasis IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
BP GO:0031163 metallo-sulfur cluster assembly IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0042176 regulation of protein catabolic process IEP Neighborhood
BP GO:0042592 homeostatic process IEP Neighborhood
BP GO:0045454 cell redox homeostasis IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051246 regulation of protein metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
MF GO:0070569 uridylyltransferase activity IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
CC GO:1905368 peptidase complex IEP Neighborhood
CC GO:1905369 endopeptidase complex IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR004883 LOB 44 141
No external refs found!