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  5. GSVIVT01024632001

GSVIVT01024632001


Description : Vesicle trafficking.endomembrane trafficking.protein recycling.Retromer protein recycling complex.SNX2 component


Gene families : OG0002219 (Archaeplastida) Phylogenetic Tree(s): OG0002219_tree ,
OG_05_0002609 (LandPlants) Phylogenetic Tree(s): OG_05_0002609_tree ,
OG_06_0002925 (SeedPlants) Phylogenetic Tree(s): OG_06_0002925_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01024632001
Cluster HCCA: Cluster_164

Target Alias Description ECC score Gene Family Method Actions
MA_10434355g0010 No alias component SNX2 of Retromer protein recycling complex 0.03 Archaeplastida
MA_42929g0010 No alias component SNX2 of Retromer protein recycling complex 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
CC GO:0008023 transcription elongation factor complex IEP Neighborhood
BP GO:0009314 response to radiation IEP Neighborhood
BP GO:0009411 response to UV IEP Neighborhood
BP GO:0009416 response to light stimulus IEP Neighborhood
BP GO:0009628 response to abiotic stimulus IEP Neighborhood
CC GO:0031011 Ino80 complex IEP Neighborhood
CC GO:0033202 DNA helicase complex IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
CC GO:0044454 nuclear chromosome part IEP Neighborhood
CC GO:0070449 elongin complex IEP Neighborhood
CC GO:0070603 SWI/SNF superfamily-type complex IEP Neighborhood
CC GO:0097346 INO80-type complex IEP Neighborhood
CC GO:1904949 ATPase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR015404 Vps5_C 2 215
No external refs found!