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  5. GSVIVT01024662001

GSVIVT01024662001


Description : RNA biosynthesis.transcriptional activation.AS2/LOB transcription factor


Gene families : OG0000101 (Archaeplastida) Phylogenetic Tree(s): OG0000101_tree ,
OG_05_0000037 (LandPlants) Phylogenetic Tree(s): OG_05_0000037_tree ,
OG_06_0000043 (SeedPlants) Phylogenetic Tree(s): OG_06_0000043_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01024662001
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00076p00127530 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AS2/LOB... 0.05 Archaeplastida
AMTR_s00080p00153120 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AS2/LOB... 0.05 Archaeplastida
AT1G06280 LBD2 LOB domain-containing protein 2 0.04 Archaeplastida
AT1G07900 LBD1 LOB domain-containing protein 1 0.04 Archaeplastida
AT1G16530 LBD3, ASL9 ASYMMETRIC LEAVES 2-like 9 0.03 Archaeplastida
AT1G65620 AS2 Lateral organ boundaries (LOB) domain family protein 0.05 Archaeplastida
AT2G28500 LBD11 LOB domain-containing protein 11 0.06 Archaeplastida
AT2G30130 LBD12, ASL5, PCK1 Lateral organ boundaries (LOB) domain family protein 0.03 Archaeplastida
AT2G30340 LBD13 LOB domain-containing protein 13 0.03 Archaeplastida
AT2G40470 LBD15, ASL11 LOB domain-containing protein 15 0.04 Archaeplastida
GSVIVT01003546001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.05 Archaeplastida
GSVIVT01004323001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.05 Archaeplastida
GSVIVT01006269001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 Archaeplastida
GSVIVT01016332001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 Archaeplastida
GSVIVT01018486001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 Archaeplastida
GSVIVT01032592001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.04 Archaeplastida
Gb_00144 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Gb_08465 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Gb_10524 No alias transcription factor (AS2/LOB) 0.06 Archaeplastida
Gb_16914 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Gb_20676 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Gb_21467 No alias transcription factor (AS2/LOB) 0.05 Archaeplastida
Gb_29853 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Gb_38978 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida
Gb_40684 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida
Gb_40767 No alias transcription factor (AS2/LOB) 0.09 Archaeplastida
LOC_Os01g07480.2 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
LOC_Os01g14030.1 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
LOC_Os01g66590.2 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
LOC_Os03g17810.1 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
LOC_Os05g07270.1 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
LOC_Os05g27980.1 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
MA_10434193g0010 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
MA_10434782g0020 No alias transcription factor (AS2/LOB) 0.05 Archaeplastida
MA_127139g0010 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
MA_16646g0010 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
MA_290245g0010 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
MA_292200g0010 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida
MA_66501g0010 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
MA_88711g0010 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
MA_9412105g0010 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
MA_9839150g0010 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Mp1g14500.1 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Mp4g10500.1 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Mp5g17820.1 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Mp7g17250.1 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida
Mp8g09250.1 No alias transcription factor (AS2/LOB) 0.01 Archaeplastida
Pp3c20_10200V3.1 No alias Lateral organ boundaries (LOB) domain family protein 0.03 Archaeplastida
Pp3c23_14630V3.1 No alias LOB domain-containing protein 13 0.04 Archaeplastida
Solyc02g067800.4.1 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Solyc02g069440.3.1 No alias transcription factor (AS2/LOB) 0.05 Archaeplastida
Solyc02g086480.1.1 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Solyc03g095940.1.1 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Solyc03g113360.4.1 No alias transcription factor (AS2/LOB) 0.05 Archaeplastida
Solyc06g050430.3.1 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Solyc06g050950.3.1 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida
Solyc06g082310.3.1 No alias transcription factor (AS2/LOB) 0.05 Archaeplastida
Solyc06g082430.2.1 No alias transcription factor (AS2/LOB) 0.05 Archaeplastida
Solyc06g082770.3.1 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Solyc11g072470.3.1 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida
Solyc12g010810.1.1 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida
Zm00001e016785_P005 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Zm00001e026736_P001 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Zm00001e029898_P001 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Zm00001e030195_P001 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Zm00001e031510_P001 No alias transcription factor (AS2/LOB) 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP Neighborhood
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006952 defense response IEP Neighborhood
MF GO:0008172 S-methyltransferase activity IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
BP GO:0008272 sulfate transport IEP Neighborhood
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Neighborhood
MF GO:0015116 sulfate transmembrane transporter activity IEP Neighborhood
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Neighborhood
MF GO:0019104 DNA N-glycosylase activity IEP Neighborhood
CC GO:0031012 extracellular matrix IEP Neighborhood
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Neighborhood
CC GO:0044421 extracellular region part IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0072348 sulfur compound transport IEP Neighborhood
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Neighborhood
InterPro domains Description Start Stop
IPR004883 LOB 6 103
No external refs found!