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  5. GSVIVT01024759001

GSVIVT01024759001


Description : Zinc finger CCCH domain-containing protein 25 OS=Oryza sativa subsp. japonica


Gene families : OG0006543 (Archaeplastida) Phylogenetic Tree(s): OG0006543_tree ,
OG_05_0008169 (LandPlants) Phylogenetic Tree(s): OG_05_0008169_tree ,
OG_06_0009845 (SeedPlants) Phylogenetic Tree(s): OG_06_0009845_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01024759001
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
AT3G47120 No alias RNA recognition motif (RRM)-containing protein 0.03 Archaeplastida
Cpa|evm.model.tig00020603.25 No alias Zinc finger CCCH domain-containing protein 42... 0.01 Archaeplastida
Cre06.g280550 No alias Zinc finger CCCH domain-containing protein 42... 0.02 Archaeplastida
Gb_25882 No alias Zinc finger CCCH domain-containing protein 25 OS=Oryza... 0.04 Archaeplastida
Mp8g06500.1 No alias Zinc finger CCCH domain-containing protein 25 OS=Oryza... 0.03 Archaeplastida
Pp3c19_15660V3.1 No alias RNA recognition motif (RRM)-containing protein 0.04 Archaeplastida
Solyc03g119430.4.1 No alias no hits & (original description: none) 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 135 155
IPR000504 RRM_dom 38 108
No external refs found!