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  5. GSVIVT01024778001

GSVIVT01024778001


Description : RNA biosynthesis.transcriptional activation.C2H2 zinc finger transcription factor


Gene families : OG0000798 (Archaeplastida) Phylogenetic Tree(s): OG0000798_tree ,
OG_05_0000584 (LandPlants) Phylogenetic Tree(s): OG_05_0000584_tree ,
OG_06_0001187 (SeedPlants) Phylogenetic Tree(s): OG_06_0001187_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01024778001
Cluster HCCA: Cluster_204

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00017p00197580 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
AT1G11490 No alias zinc finger (C2H2 type) family protein 0.03 Archaeplastida
GSVIVT01008925001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 Archaeplastida
Gb_25842 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
LOC_Os01g57650.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
LOC_Os03g15790.1 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
LOC_Os04g02510.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
LOC_Os04g59380.1 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
MA_10426153g0010 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
MA_13576g0010 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
MA_525155g0010 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
MA_5608g0010 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Solyc04g081370.2.1 No alias C2H2 zinc finger transcription factor 0.08 Archaeplastida
Zm00001e019606_P002 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0034728 nucleosome organization IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!