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Description : DNA-directed RNA polymerase subunit alpha OS=Vitis vinifera
Gene families : OG0003076 (Archaeplastida) Phylogenetic Tree(s): OG0003076_tree ,
OG_05_0002303 (LandPlants) Phylogenetic Tree(s): OG_05_0002303_tree ,
OG_06_0001676 (SeedPlants) Phylogenetic Tree(s): OG_06_0001676_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: GSVIVT01024860001 | |
| Cluster | HCCA: Cluster_165 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| ATCG00740 | RPOA | RNA polymerase subunit alpha | 0.06 | Archaeplastida | |
| LOC_Os04g16842.1 | No alias | RpoA core component plastid-encoded RNA polymerase | 0.02 | Archaeplastida | |
| LOC_Os06g39700.1 | No alias | RpoA core component plastid-encoded RNA polymerase | 0.04 | Archaeplastida | |
| Solyc00g500157.1.1 | No alias | RpoA core component plastid-encoded RNA polymerase | 0.03 | Archaeplastida | |
| Solyc01g017440.1.1 | No alias | DNA-directed RNA polymerase subunit alpha OS=Solanum... | 0.05 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000096 | sulfur amino acid metabolic process | IEP | Neighborhood |
| BP | GO:0000097 | sulfur amino acid biosynthetic process | IEP | Neighborhood |
| MF | GO:0003871 | 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity | IEP | Neighborhood |
| MF | GO:0004129 | cytochrome-c oxidase activity | IEP | Neighborhood |
| BP | GO:0006091 | generation of precursor metabolites and energy | IEP | Neighborhood |
| BP | GO:0006520 | cellular amino acid metabolic process | IEP | Neighborhood |
| BP | GO:0006555 | methionine metabolic process | IEP | Neighborhood |
| MF | GO:0008172 | S-methyltransferase activity | IEP | Neighborhood |
| MF | GO:0008324 | cation transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0009055 | electron transfer activity | IEP | Neighborhood |
| BP | GO:0009060 | aerobic respiration | IEP | Neighborhood |
| BP | GO:0009066 | aspartate family amino acid metabolic process | IEP | Neighborhood |
| BP | GO:0009067 | aspartate family amino acid biosynthetic process | IEP | Neighborhood |
| BP | GO:0009086 | methionine biosynthetic process | IEP | Neighborhood |
| CC | GO:0009522 | photosystem I | IEP | Neighborhood |
| CC | GO:0009579 | thylakoid | IEP | Neighborhood |
| BP | GO:0009767 | photosynthetic electron transport chain | IEP | Neighborhood |
| BP | GO:0009772 | photosynthetic electron transport in photosystem II | IEP | Neighborhood |
| MF | GO:0015002 | heme-copper terminal oxidase activity | IEP | Neighborhood |
| MF | GO:0015075 | ion transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0015077 | monovalent inorganic cation transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0015078 | proton transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0015318 | inorganic molecular entity transmembrane transporter activity | IEP | Neighborhood |
| BP | GO:0015980 | energy derivation by oxidation of organic compounds | IEP | Neighborhood |
| BP | GO:0015988 | energy coupled proton transmembrane transport, against electrochemical gradient | IEP | Neighborhood |
| BP | GO:0015991 | ATP hydrolysis coupled proton transport | IEP | Neighborhood |
| CC | GO:0016020 | membrane | IEP | Neighborhood |
| MF | GO:0016491 | oxidoreductase activity | IEP | Neighborhood |
| MF | GO:0016675 | oxidoreductase activity, acting on a heme group of donors | IEP | Neighborhood |
| MF | GO:0016676 | oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor | IEP | Neighborhood |
| BP | GO:0019684 | photosynthesis, light reaction | IEP | Neighborhood |
| MF | GO:0022890 | inorganic cation transmembrane transporter activity | IEP | Neighborhood |
| BP | GO:0022900 | electron transport chain | IEP | Neighborhood |
| CC | GO:0033177 | proton-transporting two-sector ATPase complex, proton-transporting domain | IEP | Neighborhood |
| MF | GO:0042085 | 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity | IEP | Neighborhood |
| BP | GO:0044272 | sulfur compound biosynthetic process | IEP | Neighborhood |
| MF | GO:0045156 | electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | IEP | Neighborhood |
| BP | GO:0045333 | cellular respiration | IEP | Neighborhood |
| BP | GO:0090662 | ATP hydrolysis coupled transmembrane transport | IEP | Neighborhood |
| CC | GO:0098796 | membrane protein complex | IEP | Neighborhood |
| BP | GO:0099131 | ATP hydrolysis coupled ion transmembrane transport | IEP | Neighborhood |
| BP | GO:0099132 | ATP hydrolysis coupled cation transmembrane transport | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |