GSVIVT01024986001

Description : RNA biosynthesis.transcriptional activation.C2C2 superfamily.DOF transcription factor

Gene families : OG0000060 (Archaeplastida) Phylogenetic Tree(s): OG0000060_tree ,
OG_05_0000025 (LandPlants) Phylogenetic Tree(s): OG_05_0000025_tree ,
OG_06_0000055 (SeedPlants) Phylogenetic Tree(s): OG_06_0000055_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01024986001
Cluster	HCCA: Cluster_229

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00012p00176640	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.06	Archaeplastida
AMTR_s00059p00213350	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.03	Archaeplastida
AT1G29160	No alias	Dof-type zinc finger DNA-binding family protein	0.04	Archaeplastida
AT2G28510	No alias	Dof-type zinc finger DNA-binding family protein	0.05	Archaeplastida
AT2G28810	No alias	Dof-type zinc finger DNA-binding family protein	0.04	Archaeplastida
AT2G34140	No alias	Dof-type zinc finger DNA-binding family protein	0.05	Archaeplastida
AT3G55370	OBP3	OBF-binding protein 3	0.03	Archaeplastida
AT4G00940	No alias	Dof-type zinc finger DNA-binding family protein	0.02	Archaeplastida
AT5G60200	TMO6	TARGET OF MONOPTEROS 6	0.07	Archaeplastida
AT5G62940	HCA2, DOF5.6	Dof-type zinc finger DNA-binding family protein	0.03	Archaeplastida
AT5G66940	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Archaeplastida
GSVIVT01005057001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.04	Archaeplastida
GSVIVT01016538001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.03	Archaeplastida
GSVIVT01016887001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.03	Archaeplastida
GSVIVT01021212001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.04	Archaeplastida
Gb_12877	No alias	transcription factor (DOF)	0.02	Archaeplastida
Gb_20867	No alias	Cyclic dof factor 3 OS=Arabidopsis thaliana...	0.06	Archaeplastida
Gb_23561	No alias	transcription factor (DOF)	0.05	Archaeplastida
LOC_Os01g15900.1	No alias	transcription factor (DOF)	0.02	Archaeplastida
LOC_Os02g15350.1	No alias	transcription factor (DOF)	0.02	Archaeplastida
LOC_Os03g07360.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
LOC_Os03g60630.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
LOC_Os05g02150.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
MA_16692g0010	No alias	transcription factor (DOF)	0.02	Archaeplastida
MA_18267g0010	No alias	transcription factor (DOF)	0.11	Archaeplastida
MA_2430g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_248613g0010	No alias	No annotation	0.03	Archaeplastida
MA_459791g0010	No alias	transcription factor (DOF)	0.04	Archaeplastida
MA_74014g0010	No alias	transcription factor (DOF)	0.03	Archaeplastida
Pp3c13_2000V3.1	No alias	cycling DOF factor 3	0.03	Archaeplastida
Pp3c16_6460V3.1	No alias	cycling DOF factor 2	0.02	Archaeplastida
Pp3c17_3860V3.1	No alias	OBF binding protein 4	0.01	Archaeplastida
Solyc02g077960.3.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
Solyc02g090220.3.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
Solyc03g112930.3.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
Solyc03g115940.4.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
Solyc03g121400.1.1	No alias	transcription factor (DOF)	0.04	Archaeplastida
Solyc06g076030.3.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
Solyc09g010680.3.1	No alias	transcription factor (DOF)	0.06	Archaeplastida
Solyc10g086440.2.1	No alias	transcription factor (DOF)	0.04	Archaeplastida
Zm00001e004809_P001	No alias	transcription factor (DOF)	0.03	Archaeplastida
Zm00001e006190_P001	No alias	transcription factor (DOF)	0.03	Archaeplastida
Zm00001e006527_P001	No alias	transcription factor (DOF)	0.06	Archaeplastida
Zm00001e012824_P001	No alias	transcription factor (DOF)	0.02	Archaeplastida
Zm00001e015414_P004	No alias	transcription factor (DOF)	0.04	Archaeplastida
Zm00001e015597_P001	No alias	transcription factor (DOF)	0.03	Archaeplastida
Zm00001e019172_P001	No alias	transcription factor (DOF)	0.04	Archaeplastida
Zm00001e023218_P004	No alias	transcription factor (DOF)	0.06	Archaeplastida
Zm00001e027411_P001	No alias	transcription factor (DOF)	0.04	Archaeplastida
Zm00001e035074_P001	No alias	transcription factor (DOF)	0.03	Archaeplastida
Zm00001e041444_P001	No alias	transcription factor (DOF)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	64	120

External Links

No external refs found!

GSVIVT01024986001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation