GSVIVT01025040001

Description : Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCB transporter

Gene families : OG0000057 (Archaeplastida) Phylogenetic Tree(s): OG0000057_tree ,
OG_05_0002865 (LandPlants) Phylogenetic Tree(s): OG_05_0002865_tree ,
OG_06_0003291 (SeedPlants) Phylogenetic Tree(s): OG_06_0003291_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01025040001
Cluster	HCCA: Cluster_225

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00018p00193700	evm_27.TU.AmTr_v1...	ABC transporter B family member 14 OS=Arabidopsis thaliana	0.02	Archaeplastida
AT3G28860	ABCB19,...	ATP binding cassette subfamily B19	0.03	Archaeplastida
AT3G55320	PGP20	P-glycoprotein 20	0.05	Archaeplastida
Cpa\|evm.model.tig00000025.1	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
Gb_20009	No alias	subfamily ABCB transporter	0.04	Archaeplastida
LOC_Os01g74470.1	No alias	subfamily ABCB transporter	0.02	Archaeplastida
LOC_Os04g54930.1	No alias	subfamily ABCB transporter	0.06	Archaeplastida
MA_929827g0010	No alias	subfamily ABCB transporter	0.03	Archaeplastida
Pp3c6_7260V3.1	No alias	ATP binding cassette subfamily B19	0.03	Archaeplastida
Smo139408	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0008144	drug binding	None	Extended
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATPase activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEP	Neighborhood
MF	GO:0003690	double-stranded DNA binding	IEP	Neighborhood
BP	GO:0035556	intracellular signal transduction	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR011527	ABC1_TM_dom	82	355
IPR011527	ABC1_TM_dom	840	1096
IPR003439	ABC_transporter-like	426	571

External Links

No external refs found!