Description : RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol III catalytic subunits.subunit 1
Gene families : OG0000599 (Archaeplastida) Phylogenetic Tree(s): OG0000599_tree ,
OG_05_0006324 (LandPlants) Phylogenetic Tree(s): OG_05_0006324_tree ,
OG_06_0006832 (SeedPlants) Phylogenetic Tree(s): OG_06_0006832_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: GSVIVT01025079001 | |
Cluster | HCCA: Cluster_197 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00023p00196820 | evm_27.TU.AmTr_v1... | RNA biosynthesis.DNA-dependent RNA polymerase (Pol)... | 0.03 | Archaeplastida | |
Cpa|evm.model.tig00022075.5 | No alias | DNA-directed RNA polymerase III subunit 1 OS=Arabidopsis thaliana | 0.02 | Archaeplastida | |
Cre16.g680900 | No alias | RNA biosynthesis.DNA-dependent RNA polymerase (Pol)... | 0.03 | Archaeplastida | |
LOC_Os02g05880.1 | No alias | subunit 1 of Pol V RNA polymerase | 0.03 | Archaeplastida | |
LOC_Os04g41490.1 | No alias | subunit 1 of Pol III RNA polymerase | 0.06 | Archaeplastida | |
MA_10436091g0010 | No alias | DNA-directed RNA polymerase III subunit 1 OS=Arabidopsis... | 0.04 | Archaeplastida | |
MA_8544g0010 | No alias | subunit 1 of Pol II RNA polymerase | 0.07 | Archaeplastida | |
Mp4g14340.1 | No alias | subunit 1 of Pol II RNA polymerase | 0.02 | Archaeplastida | |
Mp7g16790.1 | No alias | subunit 1 of Pol III RNA polymerase | 0.09 | Archaeplastida | |
Pp3c14_14540V3.1 | No alias | RNA polymerase II large subunit | 0.02 | Archaeplastida | |
Pp3c15_5270V3.1 | No alias | nuclear RNA polymerase D1B | 0.04 | Archaeplastida | |
Pp3c17_4860V3.1 | No alias | nuclear RNA polymerase C1 | 0.05 | Archaeplastida | |
Smo110201 | No alias | RNA biosynthesis.DNA-dependent RNA polymerase (Pol)... | 0.03 | Archaeplastida | |
Smo442419 | No alias | RNA biosynthesis.DNA-dependent RNA polymerase (Pol)... | 0.03 | Archaeplastida | |
Solyc11g072730.2.1 | No alias | subunit 1 of Pol III RNA polymerase | 0.1 | Archaeplastida | |
Zm00001e007729_P001 | No alias | subunit 1 of Pol III RNA polymerase | 0.06 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEA | Interproscan |
BP | GO:0006351 | transcription, DNA-templated | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003678 | DNA helicase activity | IEP | Neighborhood |
MF | GO:0004003 | ATP-dependent DNA helicase activity | IEP | Neighborhood |
MF | GO:0004386 | helicase activity | IEP | Neighborhood |
MF | GO:0004809 | tRNA (guanine-N2-)-methyltransferase activity | IEP | Neighborhood |
MF | GO:0005515 | protein binding | IEP | Neighborhood |
BP | GO:0006396 | RNA processing | IEP | Neighborhood |
BP | GO:0006397 | mRNA processing | IEP | Neighborhood |
MF | GO:0008026 | ATP-dependent helicase activity | IEP | Neighborhood |
MF | GO:0008094 | DNA-dependent ATPase activity | IEP | Neighborhood |
MF | GO:0008170 | N-methyltransferase activity | IEP | Neighborhood |
MF | GO:0008173 | RNA methyltransferase activity | IEP | Neighborhood |
MF | GO:0008175 | tRNA methyltransferase activity | IEP | Neighborhood |
MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | Neighborhood |
MF | GO:0016423 | tRNA (guanine) methyltransferase activity | IEP | Neighborhood |
BP | GO:0016579 | protein deubiquitination | IEP | Neighborhood |
CC | GO:0030684 | preribosome | IEP | Neighborhood |
CC | GO:0032040 | small-subunit processome | IEP | Neighborhood |
MF | GO:0070035 | purine NTP-dependent helicase activity | IEP | Neighborhood |
BP | GO:0070646 | protein modification by small protein removal | IEP | Neighborhood |
No external refs found! |