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  5. GSVIVT01025110001

GSVIVT01025110001


Description : RNA biosynthesis.transcriptional activation.NF-Y transcription factor complex.NF-YB component


Gene families : OG0000142 (Archaeplastida) Phylogenetic Tree(s): OG0000142_tree ,
OG_05_0000244 (LandPlants) Phylogenetic Tree(s): OG_05_0000244_tree ,
OG_06_0000165 (SeedPlants) Phylogenetic Tree(s): OG_06_0000165_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01025110001
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
AT2G47810 NF-YB5 nuclear factor Y, subunit B5 0.02 Archaeplastida
Gb_13217 No alias non-catalytic component Dpb4 of DNA polymerase epsilon complex 0.09 Archaeplastida
Solyc04g049910.4.1 No alias component NF-YB of NF-Y transcription factor complex 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
MF GO:0061630 ubiquitin protein ligase activity IEP Neighborhood
MF GO:0061659 ubiquitin-like protein ligase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR003958 CBFA_NFYB_domain 31 95
No external refs found!