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Description : RNA biosynthesis.transcriptional activation.AS2/LOB transcription factor
Gene families : OG0000101 (Archaeplastida) Phylogenetic Tree(s): OG0000101_tree ,
OG_05_0000037 (LandPlants) Phylogenetic Tree(s): OG_05_0000037_tree ,
OG_06_0000043 (SeedPlants) Phylogenetic Tree(s): OG_06_0000043_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: GSVIVT01025128001 | |
| Cluster | HCCA: Cluster_156 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G07900 | LBD1 | LOB domain-containing protein 1 | 0.04 | Archaeplastida | |
| AT2G28500 | LBD11 | LOB domain-containing protein 11 | 0.02 | Archaeplastida | |
| AT2G30340 | LBD13 | LOB domain-containing protein 13 | 0.03 | Archaeplastida | |
| AT2G40470 | LBD15, ASL11 | LOB domain-containing protein 15 | 0.02 | Archaeplastida | |
| AT3G11090 | LBD21 | LOB domain-containing protein 21 | 0.07 | Archaeplastida | |
| GSVIVT01008080001 | No alias | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.03 | Archaeplastida | |
| GSVIVT01016335001 | No alias | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.04 | Archaeplastida | |
| GSVIVT01032752001 | No alias | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.03 | Archaeplastida | |
| Gb_03653 | No alias | transcription factor (AS2/LOB) | 0.02 | Archaeplastida | |
| MA_161608g0010 | No alias | transcription factor (AS2/LOB) | 0.04 | Archaeplastida | |
| MA_16646g0010 | No alias | transcription factor (AS2/LOB) | 0.03 | Archaeplastida | |
| MA_290245g0010 | No alias | transcription factor (AS2/LOB) | 0.08 | Archaeplastida | |
| Pp3c23_14630V3.1 | No alias | LOB domain-containing protein 13 | 0.02 | Archaeplastida | |
| Solyc02g067800.4.1 | No alias | transcription factor (AS2/LOB) | 0.08 | Archaeplastida | |
| Solyc02g069440.3.1 | No alias | transcription factor (AS2/LOB) | 0.03 | Archaeplastida | |
| Solyc03g095940.1.1 | No alias | transcription factor (AS2/LOB) | 0.04 | Archaeplastida | |
| Solyc06g007390.4.1 | No alias | transcription factor (AS2/LOB) | 0.08 | Archaeplastida | |
| Solyc06g071660.3.1 | No alias | transcription factor (AS2/LOB) | 0.08 | Archaeplastida | |
| Solyc11g072470.3.1 | No alias | transcription factor (AS2/LOB) | 0.04 | Archaeplastida | |
| Zm00001e038429_P001 | No alias | transcription factor (AS2/LOB) | 0.04 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0001871 | pattern binding | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| BP | GO:0008037 | cell recognition | IEP | Neighborhood |
| BP | GO:0022414 | reproductive process | IEP | Neighborhood |
| MF | GO:0030246 | carbohydrate binding | IEP | Neighborhood |
| MF | GO:0030247 | polysaccharide binding | IEP | Neighborhood |
| MF | GO:0043531 | ADP binding | IEP | Neighborhood |
| BP | GO:0048544 | recognition of pollen | IEP | Neighborhood |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004883 | LOB | 40 | 137 |
| No external refs found! |