1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01025139001

GSVIVT01025139001


Description : Vicilin-like seed storage protein At2g28490 OS=Arabidopsis thaliana


Gene families : OG0002434 (Archaeplastida) Phylogenetic Tree(s): OG0002434_tree ,
OG_05_0003143 (LandPlants) Phylogenetic Tree(s): OG_05_0003143_tree ,
OG_06_0004140 (SeedPlants) Phylogenetic Tree(s): OG_06_0004140_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01025139001
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00089270 evm_27.TU.AmTr_v1... Vicilin-like seed storage protein At2g18540... 0.03 Archaeplastida
AT2G18540 No alias RmlC-like cupins superfamily protein 0.03 Archaeplastida
AT2G28490 No alias RmlC-like cupins superfamily protein 0.06 Archaeplastida
AT4G36700 No alias RmlC-like cupins superfamily protein 0.12 Archaeplastida
Gb_30035 No alias Vicilin-like seed storage protein At2g18540... 0.04 Archaeplastida
LOC_Os03g10110.1 No alias Vicilin-like seed storage protein At4g36700... 0.03 Archaeplastida
LOC_Os03g21790.1 No alias Vicilin-like seed storage protein At2g28490... 0.04 Archaeplastida
MA_7115598g0010 No alias Vicilin-like seed storage protein At2g28490... 0.02 Archaeplastida
MA_8072g0010 No alias Vicilin-like seed storage protein At2g28490... 0.03 Archaeplastida
Solyc02g085590.4.1 No alias Vicilin-like seed storage protein At2g18540... 0.04 Archaeplastida
Solyc06g075260.3.1 No alias Vicilin-like seed storage protein At2g28490... 0.03 Archaeplastida
Solyc06g075270.4.1 No alias Vicilin-like seed storage protein At2g28490... 0.03 Archaeplastida
Solyc11g072380.2.1 No alias Vicilin-like seed storage protein At2g28490... 0.09 Archaeplastida
Zm00001e001586_P001 No alias Vicilin-like seed storage protein At2g28490... 0.06 Archaeplastida
Zm00001e038790_P005 No alias Vicilin-like seed storage protein At2g18540... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0045735 nutrient reservoir activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004451 isocitrate lyase activity IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
MF GO:0008061 chitin binding IEP Neighborhood
MF GO:0008408 3'-5' exonuclease activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016833 oxo-acid-lyase activity IEP Neighborhood
BP GO:0019915 lipid storage IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
BP GO:0043631 RNA polyadenylation IEP Neighborhood
BP GO:0051235 maintenance of location IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
InterPro domains Description Start Stop
IPR006045 Cupin_1 6 119
IPR006045 Cupin_1 205 350
No external refs found!