Description : RNA biosynthesis.transcriptional activation.B3 superfamily.ARF transcription factor
Gene families : OG0000080 (Archaeplastida) Phylogenetic Tree(s): OG0000080_tree ,
OG_05_0000395 (LandPlants) Phylogenetic Tree(s): OG_05_0000395_tree ,
OG_06_0002431 (SeedPlants) Phylogenetic Tree(s): OG_06_0002431_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: GSVIVT01025159001 | |
Cluster | HCCA: Cluster_189 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Gb_32404 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
Gb_32864 | No alias | transcription factor (ARF) | 0.02 | Archaeplastida | |
Gb_39686 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
LOC_Os04g56850.1 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
LOC_Os06g46410.1 | No alias | transcription factor (ARF) | 0.05 | Archaeplastida | |
LOC_Os10g33940.1 | No alias | transcription factor (ARF) | 0.05 | Archaeplastida | |
MA_10432528g0010 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
MA_122218g0010 | No alias | transcription factor (ARF) | 0.04 | Archaeplastida | |
Mp1g12750.1 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
Mp2g02890.1 | No alias | Auxin response factor 19 OS=Oryza sativa subsp. japonica... | 0.02 | Archaeplastida | |
Pp3c13_4720V3.1 | No alias | auxin response factor 6 | 0.03 | Archaeplastida | |
Solyc02g077560.3.1 | No alias | transcription factor (ARF) | 0.06 | Archaeplastida | |
Solyc08g008380.4.1 | No alias | transcription factor (ARF) | 0.02 | Archaeplastida | |
Solyc09g007810.4.1 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
Solyc11g069190.2.1 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
Solyc11g069500.2.1 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
Zm00001e004554_P002 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
Zm00001e012670_P001 | No alias | transcription factor (ARF) | 0.04 | Archaeplastida | |
Zm00001e013061_P001 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
Zm00001e032423_P002 | No alias | transcription factor (ARF) | 0.02 | Archaeplastida | |
Zm00001e041866_P001 | No alias | transcription factor (ARF) | 0.04 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
CC | GO:0005634 | nucleus | IEA | Interproscan |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | Interproscan |
BP | GO:0009725 | response to hormone | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEP | Neighborhood |
MF | GO:0003746 | translation elongation factor activity | IEP | Neighborhood |
BP | GO:0006414 | translational elongation | IEP | Neighborhood |
MF | GO:0008135 | translation factor activity, RNA binding | IEP | Neighborhood |
MF | GO:0008375 | acetylglucosaminyltransferase activity | IEP | Neighborhood |
No external refs found! |