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  5. GSVIVT01025166001

GSVIVT01025166001


Description : RNA biosynthesis.transcriptional activation.C2H2 zinc finger transcription factor


Gene families : OG0000200 (Archaeplastida) Phylogenetic Tree(s): OG0000200_tree ,
OG_05_0000106 (LandPlants) Phylogenetic Tree(s): OG_05_0000106_tree ,
OG_06_0000058 (SeedPlants) Phylogenetic Tree(s): OG_06_0000058_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01025166001
Cluster HCCA: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00120910 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 Archaeplastida
AT1G03840 MGP C2H2 and C2HC zinc fingers superfamily protein 0.05 Archaeplastida
AT1G14580 No alias C2H2-like zinc finger protein 0.04 Archaeplastida
AT2G01940 ATIDD15, SGR5 C2H2-like zinc finger protein 0.03 Archaeplastida
GSVIVT01031112001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 Archaeplastida
LOC_Os01g39110.1 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
MA_10426334g0010 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
MA_10430137g0020 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
MA_10431498g0010 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Pp3c5_20980V3.1 No alias C2H2-like zinc finger protein 0.02 Archaeplastida
Solyc04g008500.4.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e003968_P002 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e004751_P001 No alias C2H2 zinc finger transcription factor 0.06 Archaeplastida
Zm00001e010628_P002 No alias C2H2 zinc finger transcription factor 0.1 Archaeplastida
Zm00001e016559_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e027791_P001 No alias C2H2 zinc finger transcription factor 0.06 Archaeplastida
Zm00001e034898_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e035365_P003 No alias C2H2 zinc finger transcription factor 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0005543 phospholipid binding IEP Neighborhood
MF GO:0008373 sialyltransferase activity IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
InterPro domains Description Start Stop
IPR022755 Znf_C2H2_jaz 62 84
No external refs found!