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  5. GSVIVT01025167001

GSVIVT01025167001


Description : Cell wall.cell wall proteins.hydroxyproline-rich glycoproteins.arabinogalactan proteins (AGPs).glycoproteins.fasciclin-type arabinogalactan protein


Gene families : OG0000994 (Archaeplastida) Phylogenetic Tree(s): OG0000994_tree ,
OG_05_0000629 (LandPlants) Phylogenetic Tree(s): OG_05_0000629_tree ,
OG_06_0000746 (SeedPlants) Phylogenetic Tree(s): OG_06_0000746_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01025167001
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00224100 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.05 Archaeplastida
AMTR_s00007p00166710 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.13 Archaeplastida
AT1G03870 FLA9 FASCICLIN-like arabinoogalactan 9 0.03 Archaeplastida
AT2G04780 FLA7 FASCICLIN-like arabinoogalactan 7 0.04 Archaeplastida
AT5G03170 ATFLA11, FLA11 FASCICLIN-like arabinogalactan-protein 11 0.2 Archaeplastida
AT5G44130 FLA13 FASCICLIN-like arabinogalactan protein 13 precursor 0.03 Archaeplastida
AT5G60490 FLA12 FASCICLIN-like arabinogalactan-protein 12 0.19 Archaeplastida
Gb_01998 No alias fasciclin-type arabinogalactan protein 0.1 Archaeplastida
LOC_Os01g06580.1 No alias fasciclin-type arabinogalactan protein 0.1 Archaeplastida
LOC_Os01g47780.1 No alias fasciclin-type arabinogalactan protein 0.03 Archaeplastida
LOC_Os02g20540.1 No alias fasciclin-type arabinogalactan protein 0.07 Archaeplastida
LOC_Os02g20560.1 No alias fasciclin-type arabinogalactan protein 0.07 Archaeplastida
LOC_Os04g39600.1 No alias fasciclin-type arabinogalactan protein 0.06 Archaeplastida
LOC_Os05g07060.1 No alias fasciclin-type arabinogalactan protein 0.08 Archaeplastida
LOC_Os05g48890.1 No alias fasciclin-type arabinogalactan protein 0.05 Archaeplastida
LOC_Os05g48900.1 No alias fasciclin-type arabinogalactan protein 0.07 Archaeplastida
LOC_Os08g39270.1 No alias fasciclin-type arabinogalactan protein 0.05 Archaeplastida
LOC_Os09g30486.1 No alias fasciclin-type arabinogalactan protein 0.07 Archaeplastida
MA_5195g0010 No alias Fasciclin-like arabinogalactan protein 12 OS=Arabidopsis... 0.03 Archaeplastida
MA_59950g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc06g075220.1.1 No alias fasciclin-type arabinogalactan protein 0.26 Archaeplastida
Solyc07g048090.2.1 No alias fasciclin-type arabinogalactan protein 0.03 Archaeplastida
Solyc07g053540.1.1 No alias fasciclin-type arabinogalactan protein 0.02 Archaeplastida
Solyc09g007650.3.1 No alias fasciclin-type arabinogalactan protein 0.24 Archaeplastida
Solyc09g007660.1.1 No alias fasciclin-type arabinogalactan protein 0.28 Archaeplastida
Solyc11g069250.2.1 No alias fasciclin-type arabinogalactan protein 0.28 Archaeplastida
Zm00001e010053_P001 No alias fasciclin-type arabinogalactan protein 0.02 Archaeplastida
Zm00001e020209_P002 No alias fasciclin-type arabinogalactan protein 0.05 Archaeplastida
Zm00001e024743_P001 No alias fasciclin-type arabinogalactan protein 0.04 Archaeplastida
Zm00001e026526_P001 No alias fasciclin-type arabinogalactan protein 0.04 Archaeplastida
Zm00001e027481_P001 No alias fasciclin-type arabinogalactan protein 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP Neighborhood
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006952 defense response IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
MF GO:0008172 S-methyltransferase activity IEP Neighborhood
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0010215 cellulose microfibril organization IEP Neighborhood
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP Neighborhood
MF GO:0015020 glucuronosyltransferase activity IEP Neighborhood
BP GO:0016049 cell growth IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Neighborhood
MF GO:0019104 DNA N-glycosylase activity IEP Neighborhood
BP GO:0030198 extracellular matrix organization IEP Neighborhood
CC GO:0031012 extracellular matrix IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
BP GO:0040007 growth IEP Neighborhood
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP Neighborhood
BP GO:0043062 extracellular structure organization IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Neighborhood
CC GO:0044421 extracellular region part IEP Neighborhood
MF GO:0045735 nutrient reservoir activity IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
InterPro domains Description Start Stop
IPR000782 FAS1_domain 81 135
No external refs found!