Description : Cell wall.pectin.rhamnogalacturonan I.modification and degradation.beta-galactosidase
Gene families : OG0000133 (Archaeplastida) Phylogenetic Tree(s): OG0000133_tree ,
OG_05_0000245 (LandPlants) Phylogenetic Tree(s): OG_05_0000245_tree ,
OG_06_0001075 (SeedPlants) Phylogenetic Tree(s): OG_06_0001075_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: GSVIVT01025170001 | |
Cluster | HCCA: Cluster_41 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00136p00108810 | evm_27.TU.AmTr_v1... | Cell wall.pectin.rhamnogalacturonan I.modification and... | 0.03 | Archaeplastida | |
AMTR_s00138p00054750 | evm_27.TU.AmTr_v1... | Cell wall.pectin.rhamnogalacturonan I.modification and... | 0.03 | Archaeplastida | |
AT3G13750 | BGAL1 | beta galactosidase 1 | 0.03 | Archaeplastida | |
AT4G26140 | BGAL12 | beta-galactosidase 12 | 0.03 | Archaeplastida | |
GSVIVT01008835001 | No alias | Cell wall.pectin.rhamnogalacturonan I.modification and... | 0.03 | Archaeplastida | |
GSVIVT01016849001 | No alias | Cell wall.pectin.rhamnogalacturonan I.modification and... | 0.03 | Archaeplastida | |
Gb_12091 | No alias | beta-galactosidase (BGAL) | 0.03 | Archaeplastida | |
Gb_40554 | No alias | beta-galactosidase (BGAL) | 0.04 | Archaeplastida | |
Gb_41532 | No alias | 1,2-beta-galactosidase. beta-galactosidase (BGAL) | 0.06 | Archaeplastida | |
LOC_Os01g39830.1 | No alias | beta-galactosidase (BGAL) | 0.04 | Archaeplastida | |
LOC_Os01g65460.1 | No alias | 1,2-beta-galactosidase. beta-galactosidase (BGAL) | 0.04 | Archaeplastida | |
LOC_Os02g12730.1 | No alias | beta-galactosidase (BGAL) | 0.04 | Archaeplastida | |
LOC_Os03g06940.1 | No alias | beta-galactosidase (BGAL) | 0.03 | Archaeplastida | |
MA_10427427g0010 | No alias | beta-galactosidase (BGAL) | 0.06 | Archaeplastida | |
Solyc01g111540.4.1 | No alias | beta-galactosidase (BGAL) | 0.06 | Archaeplastida | |
Solyc02g078950.4.1 | No alias | beta-galactosidase (BGAL) | 0.05 | Archaeplastida | |
Solyc02g084720.3.1 | No alias | beta-galactosidase (BGAL) | 0.07 | Archaeplastida | |
Solyc06g062580.3.1 | No alias | beta-galactosidase (BGAL) | 0.05 | Archaeplastida | |
Zm00001e003992_P005 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
Zm00001e020528_P001 | No alias | beta-galactosidase (BGAL) | 0.05 | Archaeplastida | |
Zm00001e039014_P001 | No alias | beta-galactosidase (BGAL) | 0.03 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0030246 | carbohydrate binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003968 | RNA-directed 5'-3' RNA polymerase activity | IEP | Neighborhood |
MF | GO:0004190 | aspartic-type endopeptidase activity | IEP | Neighborhood |
BP | GO:0005975 | carbohydrate metabolic process | IEP | Neighborhood |
MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Neighborhood |
MF | GO:0070001 | aspartic-type peptidase activity | IEP | Neighborhood |
No external refs found! |