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  5. GSVIVT01025189001

GSVIVT01025189001


No description available


Gene families : OG0002167 (Archaeplastida) Phylogenetic Tree(s): OG0002167_tree ,
OG_05_0002069 (LandPlants) Phylogenetic Tree(s): OG_05_0002069_tree ,
OG_06_0002451 (SeedPlants) Phylogenetic Tree(s): OG_06_0002451_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01025189001
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00105p00048810 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.19 Archaeplastida
AMTR_s00148p00026900 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.07 Archaeplastida
AT2G37190 No alias Ribosomal protein L11 family protein 0.29 Archaeplastida
AT3G53430 No alias Ribosomal protein L11 family protein 0.21 Archaeplastida
AT5G60670 No alias Ribosomal protein L11 family protein 0.24 Archaeplastida
Cpa|evm.model.tig00001339.27 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.18 Archaeplastida
Cre12.g528750 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.28 Archaeplastida
LOC_Os02g47140.1 No alias component RPL12 of LSU proteome component 0.2 Archaeplastida
LOC_Os04g50990.1 No alias component RPL12 of LSU proteome component 0.28 Archaeplastida
MA_10427147g0010 No alias component RPL12 of LSU proteome component 0.19 Archaeplastida
Mp3g02020.1 No alias component RPL12 of LSU proteome component 0.3 Archaeplastida
Pp3c15_14410V3.1 No alias Ribosomal protein L11 family protein 0.31 Archaeplastida
Pp3c16_2860V3.1 No alias Ribosomal protein L11 family protein 0.27 Archaeplastida
Pp3c27_660V3.1 No alias Ribosomal protein L11 family protein 0.31 Archaeplastida
Pp3c6_19290V3.1 No alias Ribosomal protein L11 family protein 0.25 Archaeplastida
Pp3c9_15380V3.1 No alias Ribosomal protein L11 family protein 0.29 Archaeplastida
Smo227409 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.1 Archaeplastida
Solyc06g075180.1.1 No alias component RPL12 of LSU proteome component 0.23 Archaeplastida
Solyc11g065670.1.1 No alias component RPL12 of LSU proteome component 0.19 Archaeplastida
Solyc11g069440.1.1 No alias component RPL12 of LSU proteome component 0.29 Archaeplastida
Zm00001e007067_P001 No alias component RPL12 of LSU proteome component 0.21 Archaeplastida
Zm00001e008316_P001 No alias component RPL12 of LSU proteome component 0.23 Archaeplastida
Zm00001e023297_P001 No alias component RPL12 of LSU proteome component 0.28 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!