1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01025214001

GSVIVT01025214001


Description : Secondary metabolism.phenolics.p-coumaroyl-CoA synthesis.phenylalanine ammonia lyase (PAL)


Gene families : OG0000239 (Archaeplastida) Phylogenetic Tree(s): OG0000239_tree ,
OG_05_0000119 (LandPlants) Phylogenetic Tree(s): OG_05_0000119_tree ,
OG_06_0010412 (SeedPlants) Phylogenetic Tree(s): OG_06_0010412_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01025214001
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00201680 evm_27.TU.AmTr_v1... Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.03 Archaeplastida
AMTR_s00024p00201930 evm_27.TU.AmTr_v1... Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.04 Archaeplastida
AMTR_s00024p00202590 evm_27.TU.AmTr_v1... Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.03 Archaeplastida
AMTR_s00032p00159210 evm_27.TU.AmTr_v1... Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.02 Archaeplastida
AMTR_s00148p00088930 evm_27.TU.AmTr_v1... Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.07 Archaeplastida
AT2G37040 ATPAL1, PAL1 PHE ammonia lyase 1 0.06 Archaeplastida
AT3G53260 ATPAL2, PAL2 phenylalanine ammonia-lyase 2 0.05 Archaeplastida
GSVIVT01015138001 No alias Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.03 Archaeplastida
GSVIVT01024292001 No alias Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.04 Archaeplastida
GSVIVT01024299001 No alias Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.05 Archaeplastida
GSVIVT01024305001 No alias Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.03 Archaeplastida
GSVIVT01024306001 No alias Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.05 Archaeplastida
GSVIVT01024315001 No alias Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.05 Archaeplastida
Gb_16672 No alias phenylalanine ammonia lyase (PAL) 0.09 Archaeplastida
Gb_41796 No alias phenylalanine ammonia lyase (PAL) 0.05 Archaeplastida
LOC_Os02g41630.2 No alias phenylalanine ammonia lyase (PAL) 0.05 Archaeplastida
LOC_Os02g41650.3 No alias phenylalanine ammonia lyase (PAL) 0.06 Archaeplastida
LOC_Os02g41670.1 No alias phenylalanine ammonia lyase (PAL) 0.03 Archaeplastida
LOC_Os02g41680.1 No alias phenylalanine ammonia lyase (PAL) 0.04 Archaeplastida
LOC_Os04g43760.1 No alias phenylalanine ammonia lyase (PAL) 0.07 Archaeplastida
LOC_Os04g43800.1 No alias phenylalanine ammonia lyase (PAL) 0.06 Archaeplastida
LOC_Os05g35290.1 No alias phenylalanine ammonia lyase (PAL) 0.03 Archaeplastida
LOC_Os11g48110.1 No alias phenylalanine ammonia lyase (PAL) 0.04 Archaeplastida
MA_123220g0010 No alias phenylalanine ammonia lyase (PAL) 0.04 Archaeplastida
MA_189052g0010 No alias Phenylalanine ammonia-lyase OS=Pinus taeda... 0.03 Archaeplastida
MA_44561g0010 No alias phenylalanine ammonia lyase (PAL) 0.09 Archaeplastida
Mp1g05190.1 No alias phenylalanine ammonia lyase (PAL) 0.05 Archaeplastida
Mp4g03590.1 No alias phenylalanine ammonia lyase (PAL) 0.03 Archaeplastida
Mp4g10060.1 No alias phenylalanine ammonia lyase (PAL) 0.03 Archaeplastida
Mp4g14110.1 No alias phenylalanine ammonia lyase (PAL) 0.03 Archaeplastida
Mp4g14130.1 No alias Phenylalanine ammonia-lyase class 1 (Fragment)... 0.08 Archaeplastida
Mp4g14140.1 No alias phenylalanine ammonia lyase (PAL) 0.09 Archaeplastida
Mp4g14160.1 No alias phenylalanine ammonia lyase (PAL) 0.08 Archaeplastida
Mp4g14170.1 No alias phenylalanine ammonia lyase (PAL) 0.08 Archaeplastida
Mp4g14210.1 No alias phenylalanine ammonia lyase (PAL) 0.05 Archaeplastida
Mp7g14880.1 No alias phenylalanine ammonia lyase (PAL) 0.04 Archaeplastida
Pp3c13_9000V3.1 No alias phenylalanine ammonia-lyase 4 0.11 Archaeplastida
Pp3c19_13690V3.1 No alias phenylalanine ammonia-lyase 4 0.09 Archaeplastida
Pp3c1_18830V3.1 No alias PHE ammonia lyase 1 0.1 Archaeplastida
Pp3c1_18940V3.1 No alias PHE ammonia lyase 1 0.12 Archaeplastida
Pp3c21_7670V3.1 No alias phenylalanine ammonia-lyase 4 0.03 Archaeplastida
Pp3c26_2420V3.1 No alias phenylalanine ammonia-lyase 2 0.02 Archaeplastida
Pp3c2_30610V3.1 No alias phenylalanine ammonia-lyase 4 0.1 Archaeplastida
Pp3c2_32330V3.1 No alias phenylalanine ammonia-lyase 4 0.02 Archaeplastida
Pp3c2_32410V3.1 No alias phenylalanine ammonia-lyase 4 0.07 Archaeplastida
Solyc05g056170.3.1 No alias phenylalanine ammonia lyase (PAL) 0.11 Archaeplastida
Solyc09g007910.4.1 No alias phenylalanine ammonia lyase (PAL) 0.05 Archaeplastida
Solyc09g007920.4.1 No alias phenylalanine ammonia lyase (PAL) 0.03 Archaeplastida
Solyc10g011925.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc10g086180.2.1 No alias phenylalanine ammonia lyase (PAL) 0.06 Archaeplastida
Zm00001e005064_P001 No alias phenylalanine ammonia lyase (PAL) 0.03 Archaeplastida
Zm00001e007572_P001 No alias phenylalanine ammonia lyase (PAL) 0.07 Archaeplastida
Zm00001e015155_P001 No alias phenylalanine ammonia lyase (PAL) 0.07 Archaeplastida
Zm00001e015156_P001 No alias phenylalanine ammonia lyase (PAL) 0.03 Archaeplastida
Zm00001e015157_P001 No alias phenylalanine ammonia lyase (PAL) 0.03 Archaeplastida
Zm00001e023031_P002 No alias phenylalanine ammonia lyase (PAL) 0.05 Archaeplastida
Zm00001e023032_P002 No alias phenylalanine ammonia lyase (PAL) 0.05 Archaeplastida
Zm00001e023033_P001 No alias phenylalanine ammonia lyase (PAL) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Neighborhood
MF GO:0004180 carboxypeptidase activity IEP Neighborhood
MF GO:0004185 serine-type carboxypeptidase activity IEP Neighborhood
MF GO:0004743 pyruvate kinase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0006090 pyruvate metabolic process IEP Neighborhood
BP GO:0006096 glycolytic process IEP Neighborhood
BP GO:0006165 nucleoside diphosphate phosphorylation IEP Neighborhood
BP GO:0006694 steroid biosynthetic process IEP Neighborhood
BP GO:0006733 oxidoreduction coenzyme metabolic process IEP Neighborhood
BP GO:0006757 ATP generation from ADP IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0008202 steroid metabolic process IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0008238 exopeptidase activity IEP Neighborhood
BP GO:0009132 nucleoside diphosphate metabolic process IEP Neighborhood
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP Neighborhood
BP GO:0009166 nucleotide catabolic process IEP Neighborhood
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP Neighborhood
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP Neighborhood
MF GO:0016229 steroid dehydrogenase activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016872 intramolecular lyase activity IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP Neighborhood
BP GO:0019362 pyridine nucleotide metabolic process IEP Neighborhood
BP GO:0019363 pyridine nucleotide biosynthetic process IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0030955 potassium ion binding IEP Neighborhood
MF GO:0031420 alkali metal ion binding IEP Neighborhood
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Neighborhood
BP GO:0034404 nucleobase-containing small molecule biosynthetic process IEP Neighborhood
BP GO:0042866 pyruvate biosynthetic process IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0046031 ADP metabolic process IEP Neighborhood
BP GO:0046434 organophosphate catabolic process IEP Neighborhood
BP GO:0046496 nicotinamide nucleotide metabolic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0046939 nucleotide phosphorylation IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0070008 serine-type exopeptidase activity IEP Neighborhood
BP GO:0072524 pyridine-containing compound metabolic process IEP Neighborhood
BP GO:0072525 pyridine-containing compound biosynthetic process IEP Neighborhood
BP GO:1901292 nucleoside phosphate catabolic process IEP Neighborhood
BP GO:1901362 organic cyclic compound biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001106 Aromatic_Lyase 2 183
IPR001106 Aromatic_Lyase 186 377
No external refs found!