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Description : RNA biosynthesis.transcriptional activation.bHLH transcription factor
Gene families : OG0000051 (Archaeplastida) Phylogenetic Tree(s): OG0000051_tree ,
OG_05_0000668 (LandPlants) Phylogenetic Tree(s): OG_05_0000668_tree ,
OG_06_0000736 (SeedPlants) Phylogenetic Tree(s): OG_06_0000736_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: GSVIVT01025313001 | |
| Cluster | HCCA: Cluster_27 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00016p00138470 | evm_27.TU.AmTr_v1... | External stimuli response.light.UV-A/blue... | 0.03 | Archaeplastida | |
| AMTR_s00022p00228970 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.bHLH... | 0.03 | Archaeplastida | |
| AMTR_s00065p00184910 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.bHLH... | 0.03 | Archaeplastida | |
| AMTR_s00079p00137860 | evm_27.TU.AmTr_v1... | External stimuli response.light.UV-A/blue... | 0.03 | Archaeplastida | |
| AMTR_s00133p00027110 | evm_27.TU.AmTr_v1... | External stimuli response.light.UV-A/blue... | 0.02 | Archaeplastida | |
| AT1G05805 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.04 | Archaeplastida | |
| AT1G26260 | CIB5 | cryptochrome-interacting basic-helix-loop-helix 5 | 0.03 | Archaeplastida | |
| AT1G68920 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.03 | Archaeplastida | |
| AT2G18300 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.05 | Archaeplastida | |
| AT4G36540 | BEE2 | BR enhanced expression 2 | 0.05 | Archaeplastida | |
| Gb_21366 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
| Gb_22201 | No alias | transcription factor (bHLH) | 0.01 | Archaeplastida | |
| Gb_28850 | No alias | transcription factor (bHLH) | 0.02 | Archaeplastida | |
| Gb_36369 | No alias | transcription factor (bHLH). transcriptional regulator (CIB) | 0.03 | Archaeplastida | |
| LOC_Os01g67480.1 | No alias | transcription factor (bHLH) | 0.03 | Archaeplastida | |
| LOC_Os01g68700.1 | No alias | transcription factor (bHLH). transcriptional regulator (CIB) | 0.03 | Archaeplastida | |
| LOC_Os02g39140.1 | No alias | transcription factor (bHLH) | 0.02 | Archaeplastida | |
| LOC_Os03g51910.1 | No alias | transcription factor (bHLH). transcriptional regulator (CIB) | 0.02 | Archaeplastida | |
| LOC_Os08g39630.1 | No alias | transcription factor (bHLH) | 0.04 | Archaeplastida | |
| LOC_Os09g25040.1 | No alias | transcription factor (bHLH) | 0.04 | Archaeplastida | |
| MA_105921g0010 | No alias | transcription factor (bHLH). transcriptional regulator (CIB) | 0.02 | Archaeplastida | |
| MA_158362g0010 | No alias | transcription factor (bHLH). transcriptional regulator (CIB) | 0.03 | Archaeplastida | |
| MA_158850g0010 | No alias | transcription factor (bHLH) | 0.03 | Archaeplastida | |
| MA_182616g0010 | No alias | transcription factor (bHLH). transcriptional regulator (CIB) | 0.01 | Archaeplastida | |
| MA_42080g0010 | No alias | transcription factor (bHLH). transcriptional regulator (CIB) | 0.03 | Archaeplastida | |
| Mpzg01410.1 | No alias | transcription factor (bHLH) | 0.02 | Archaeplastida | |
| Pp3c12_25990V3.1 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.02 | Archaeplastida | |
| Pp3c18_6880V3.1 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.02 | Archaeplastida | |
| Pp3c19_11400V3.1 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.02 | Archaeplastida | |
| Pp3c1_33270V3.1 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.02 | Archaeplastida | |
| Pp3c21_14114V3.1 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.02 | Archaeplastida | |
| Pp3c2_620V3.1 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.03 | Archaeplastida | |
| Solyc01g010130.4.1 | No alias | transcription factor (bHLH). transcriptional regulator (CIB) | 0.03 | Archaeplastida | |
| Solyc03g113560.4.1 | No alias | transcription factor (bHLH) | 0.04 | Archaeplastida | |
| Solyc04g005220.3.1 | No alias | transcription factor (bHLH). transcriptional regulator (CIB) | 0.02 | Archaeplastida | |
| Solyc04g007300.4.1 | No alias | transcription factor (bHLH). transcriptional regulator (CIB) | 0.03 | Archaeplastida | |
| Solyc05g006650.3.1 | No alias | transcription factor (bHLH). transcriptional regulator (CIB) | 0.04 | Archaeplastida | |
| Solyc12g098620.2.1 | No alias | transcription factor (bHLH). transcriptional regulator (CIB) | 0.03 | Archaeplastida | |
| Solyc12g100140.3.1 | No alias | transcription factor (bHLH) | 0.03 | Archaeplastida | |
| Zm00001e003701_P003 | No alias | transcription factor (bHLH). transcriptional regulator (CIB) | 0.03 | Archaeplastida | |
| Zm00001e005554_P001 | No alias | transcription factor (bHLH). transcriptional regulator (CIB) | 0.02 | Archaeplastida | |
| Zm00001e010060_P001 | No alias | transcription factor (bHLH) | 0.03 | Archaeplastida | |
| Zm00001e010138_P002 | No alias | transcription factor (bHLH). transcriptional regulator (CIB) | 0.04 | Archaeplastida | |
| Zm00001e010540_P001 | No alias | transcription factor (bHLH) | 0.04 | Archaeplastida | |
| Zm00001e011866_P002 | No alias | transcription factor (bHLH) | 0.03 | Archaeplastida | |
| Zm00001e015045_P002 | No alias | transcription factor (bHLH) | 0.03 | Archaeplastida | |
| Zm00001e018857_P002 | No alias | transcription factor (bHLH). transcriptional regulator (CIB) | 0.04 | Archaeplastida | |
| Zm00001e018946_P001 | No alias | transcription factor (bHLH) | 0.05 | Archaeplastida | |
| Zm00001e028489_P003 | No alias | transcription factor (bHLH). transcriptional regulator (CIB) | 0.05 | Archaeplastida | |
| Zm00001e032950_P002 | No alias | transcription factor (bHLH) | 0.06 | Archaeplastida | |
| Zm00001e034658_P003 | No alias | transcription factor (bHLH). transcriptional regulator (CIB) | 0.02 | Archaeplastida | |
| Zm00001e035219_P001 | No alias | transcription factor (bHLH) | 0.03 | Archaeplastida | |
| Zm00001e036318_P001 | No alias | transcription factor (bHLH) | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0046983 | protein dimerization activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000155 | phosphorelay sensor kinase activity | IEP | Neighborhood |
| MF | GO:0003677 | DNA binding | IEP | Neighborhood |
| MF | GO:0003873 | 6-phosphofructo-2-kinase activity | IEP | Neighborhood |
| MF | GO:0004366 | glycerol-3-phosphate O-acyltransferase activity | IEP | Neighborhood |
| MF | GO:0004673 | protein histidine kinase activity | IEP | Neighborhood |
| MF | GO:0005215 | transporter activity | IEP | Neighborhood |
| MF | GO:0005216 | ion channel activity | IEP | Neighborhood |
| MF | GO:0005337 | nucleoside transmembrane transporter activity | IEP | Neighborhood |
| BP | GO:0006000 | fructose metabolic process | IEP | Neighborhood |
| BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Neighborhood |
| BP | GO:0006359 | regulation of transcription by RNA polymerase III | IEP | Neighborhood |
| BP | GO:0008272 | sulfate transport | IEP | Neighborhood |
| MF | GO:0008443 | phosphofructokinase activity | IEP | Neighborhood |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Neighborhood |
| BP | GO:0009890 | negative regulation of biosynthetic process | IEP | Neighborhood |
| BP | GO:0009892 | negative regulation of metabolic process | IEP | Neighborhood |
| MF | GO:0010181 | FMN binding | IEP | Neighborhood |
| BP | GO:0010468 | regulation of gene expression | IEP | Neighborhood |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0010558 | negative regulation of macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0010629 | negative regulation of gene expression | IEP | Neighborhood |
| MF | GO:0015116 | sulfate transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0015267 | channel activity | IEP | Neighborhood |
| MF | GO:0015318 | inorganic molecular entity transmembrane transporter activity | IEP | Neighborhood |
| BP | GO:0015858 | nucleoside transport | IEP | Neighborhood |
| MF | GO:0015932 | nucleobase-containing compound transmembrane transporter activity | IEP | Neighborhood |
| BP | GO:0016480 | negative regulation of transcription by RNA polymerase III | IEP | Neighborhood |
| MF | GO:0016624 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor | IEP | Neighborhood |
| MF | GO:0016775 | phosphotransferase activity, nitrogenous group as acceptor | IEP | Neighborhood |
| MF | GO:0019200 | carbohydrate kinase activity | IEP | Neighborhood |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0019222 | regulation of metabolic process | IEP | Neighborhood |
| MF | GO:0022803 | passive transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0022838 | substrate-specific channel activity | IEP | Neighborhood |
| MF | GO:0022857 | transmembrane transporter activity | IEP | Neighborhood |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | Neighborhood |
| BP | GO:0031324 | negative regulation of cellular metabolic process | IEP | Neighborhood |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Neighborhood |
| BP | GO:0031327 | negative regulation of cellular biosynthetic process | IEP | Neighborhood |
| MF | GO:0042578 | phosphoric ester hydrolase activity | IEP | Neighborhood |
| BP | GO:0045892 | negative regulation of transcription, DNA-templated | IEP | Neighborhood |
| BP | GO:0045934 | negative regulation of nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0048523 | negative regulation of cellular process | IEP | Neighborhood |
| BP | GO:0050789 | regulation of biological process | IEP | Neighborhood |
| BP | GO:0050794 | regulation of cellular process | IEP | Neighborhood |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0051172 | negative regulation of nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Neighborhood |
| BP | GO:0051253 | negative regulation of RNA metabolic process | IEP | Neighborhood |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0065007 | biological regulation | IEP | Neighborhood |
| BP | GO:0072348 | sulfur compound transport | IEP | Neighborhood |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Neighborhood |
| BP | GO:1901264 | carbohydrate derivative transport | IEP | Neighborhood |
| MF | GO:1901505 | carbohydrate derivative transmembrane transporter activity | IEP | Neighborhood |
| BP | GO:1901642 | nucleoside transmembrane transport | IEP | Neighborhood |
| MF | GO:1901682 | sulfur compound transmembrane transporter activity | IEP | Neighborhood |
| BP | GO:1902679 | negative regulation of RNA biosynthetic process | IEP | Neighborhood |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Neighborhood |
| BP | GO:1903507 | negative regulation of nucleic acid-templated transcription | IEP | Neighborhood |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:2000113 | negative regulation of cellular macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR011598 | bHLH_dom | 231 | 276 |
| No external refs found! |